Gene Paes_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1421 
Symbol 
ID6458935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1547172 
End bp1548146 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content50% 
IMG OID642725406 
Producthypothetical protein 
Protein accessionYP_002016089 
Protein GI194334229 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.182129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT CTCGGCCTCC GGTAGTACGC ATGTATTTTC TCGATGATCA GTTGCGAAAG 
AACCTCTTTC CGAATTGCTC CTCTGTTGCC GCCTATTTTG AGGTTTCTCC CAAAACGATT
CAGCGAGATG TCGATTATAT GCGCGACCTG CTCGGCGCAC CTATCGAATA TCACAGGAAA
AAAAGGGGCT TTTTCTATCG GGAAAACTGG GTGTTTCTCC CTTCCGCTTT TCTCGAACAG
GACGAAGCGG AGGCCCTGAA GGTGACCAAG AAAGTACTCT CCCACTATAC TGGAACGCCG
TATTACGACG AGGTCAGCAG TGCGCTTGAC AAGGTATTGC AATACCTGCC AAAAACGTTC
GGCGATAGCG ACCTTTTCAG CGTCTACTCC TTCGAGCATT CTGCAGTGAC GCATGAACTC
TCCACTCATT TTGTCACCCT CGAAGATGCT ATCCGTCAGA AAATGAAAAT CAGCATCGTT
TACGATGCCC CGTCTAGCGG AGCAATGTCG GAAAGGACGA TACATCCTTA CAGATTGCAC
TATTCTCATG CAGCACAGCG GTGGTATCTC GTGGCTTACT GTGAACTGCG CATGGGTATG
CGCACTTTCG CTATCGGCAG AATCAAAAAG CTGCAGCTGC TGACCGAGCA TTTCGAGTGT
CGCCCGGGAT TCTCGGTAGA CGCGTATCTG TCGAAGACGT TTGATCAGAT GGTCGGCGAA
ACGGAGCAGG AAGTATCCAT CCGTTTTTCA GCCTATCAGG CTCCCTGGAT CAAAGAACGC
CAGTGGCATC CATCCCAGAA GATCAGTGAA CATCATGAAG GCGGTATAAC CATCAGTTTC
AATGTCGGAG CGCTTGATGC CGTTAAACGC TGGGTCATGC GCTACGGCAA GGAAGCCGAA
GTCATAGAAC CGCAGGAGTT ACGGGATATG GTGAGGGATG AGGTTCGGGA TATGGGGGTG
GTGTATGAAG AGTAA
 
Protein sequence
MKQSRPPVVR MYFLDDQLRK NLFPNCSSVA AYFEVSPKTI QRDVDYMRDL LGAPIEYHRK 
KRGFFYRENW VFLPSAFLEQ DEAEALKVTK KVLSHYTGTP YYDEVSSALD KVLQYLPKTF
GDSDLFSVYS FEHSAVTHEL STHFVTLEDA IRQKMKISIV YDAPSSGAMS ERTIHPYRLH
YSHAAQRWYL VAYCELRMGM RTFAIGRIKK LQLLTEHFEC RPGFSVDAYL SKTFDQMVGE
TEQEVSIRFS AYQAPWIKER QWHPSQKISE HHEGGITISF NVGALDAVKR WVMRYGKEAE
VIEPQELRDM VRDEVRDMGV VYEE