Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1401 |
Symbol | |
ID | 6460432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1523234 |
End bp | 1524076 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642725386 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002016069 |
Protein GI | 194334209 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0891461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.79487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATAC CTGATACCCC TTTTAATCCT GCTTCTGCTG ATTTTTTTGG TATCTATCCT CTTACGCGCT CTTTGCCGGA ATTGCAGGAT CTTTCAGTCC GATTCACTCT TTTTCATATT GTCTGGTTTA CCGGAGAGTC TTCTTCGCAA TATGTGATTG ATTTCGAGCG ATATCCCATT GCGGCCGACA GTCTCTATTG CCTCGGCCCC TGGCAGGTGC ATAGGGTTTC CGGTGAGCCT GCCGAAGGGA TACGGATCAT TTTTTCCGGT GACATTTACG GCGATGTTGT CAATGATGAT GTTCGCTGGC TGTTTAATCC TCTGGTCAAT GACGGGGTCA GGCTCAAGGC TGATATTGTC GAACCTTTAC GAATGCTGCT GCGTCTTATG GTACGCGAGT CCTCTGGTGC AGGTGAGACA GATATGCTCA AGGCCTATCT CAAAGCTTTT CTTTTGCATC TGATCCGCTC CGGGTCTGGC GAAAGGATTT CGTTCGGTGT CGATGCGGCG CGCCTCATGA TCCTTTTTTC TCTTGTCGAT ACGCACTACA GGAAGGAGCG CAAGGTCTCC TTTTATGCGT CAAGGATAGG GTTAAGTCCG AAGCGTCTCA ATGAGATTCT CAAAATGGCT ACCGGTTTGA CGCTGACCGC TCTTCTTCAT TACCGGCTGA TTATCGAGGC CCGGCGCCAG ATCAGTTACG GTAAGAGGAA TTTCAAGGAG ATCGCTTTTG ATCTGGGCTT CAGTGAACAG GCCTATTTCA GCAGGTTTTT TAAGAAAAAG ACAGGACAGA CGCCCGAAGC CTTTCGGCAG CAAATGTTCA AATTGTCCAA ACAAAGCGGC TGA
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Protein sequence | MIIPDTPFNP ASADFFGIYP LTRSLPELQD LSVRFTLFHI VWFTGESSSQ YVIDFERYPI AADSLYCLGP WQVHRVSGEP AEGIRIIFSG DIYGDVVNDD VRWLFNPLVN DGVRLKADIV EPLRMLLRLM VRESSGAGET DMLKAYLKAF LLHLIRSGSG ERISFGVDAA RLMILFSLVD THYRKERKVS FYASRIGLSP KRLNEILKMA TGLTLTALLH YRLIIEARRQ ISYGKRNFKE IAFDLGFSEQ AYFSRFFKKK TGQTPEAFRQ QMFKLSKQSG
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