Gene Paes_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1390 
Symbol 
ID6460413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1509884 
End bp1510888 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content51% 
IMG OID642725375 
Productbacteriochlorophyll/chlorophyll a synthase 
Protein accessionYP_002016058 
Protein GI194334198 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.937819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATT TTCTCTCAAA ACAACAGAAC ACTAAACGGA AACAAACCGG CAGCACAGGA 
ACCTTTCCCC GGTTGCACGT CAGAAAAACG GTTTCTCAGA AAAAAAGACC TCCGGAAACA
ATATCCAGAA TCGCGTTGCT CATCCGCTTT CTCAAACCCG TCACCTGGAT TCCGGTCATC
TGGAGTTTTC TTTGCGGAGC AGTCGCAAGC GGAGCATTTG GATGGAATGA ACTGTTCGGA
TGGAAATTTT TTCTCGCCAT CCTGCTGACA GGACCGCTGG CCAGCGGAAC ATGTCAGATG
CTCAATGATT ATTTCGACCG CGATCTCGAT GAAATCAACG AACCTTATCG GCCTATCCCG
GGAGGGGCGA TATCACTGAA AAACGCTACG CTGCTGATAG CCGTCTGGTC TGTTCTTTCG
GTGATCACAG GCTACCTGAT ACACCCCGTT ATCGGTCTCT ATGTCGTTAT CGGGATTATC
AACGCTCACC TCTACAGCGC CAATCCGATA AAACTGAAAA AAAGGCTCTG GGCCGGCAAT
ATCATCGTTG CCGTCTCCTA TCTGGTCATC CCCTGGGTTG CCGGTGAAAT CGCCTATTCG
TCTCAGATCT CGCTGCAGGC ATTGATGCCT TCGCTCATCG TTGCAGGCCT GTTTACCCTT
TCAAGCACGG GAACCATGAC AATCAACGAT TTCAAATCTG TTGAGGGTGA TCGTCAGAAT
GCTATCAGAA CCCTTCCCGT GGTTTTTGGG GAATCAAAAG CTGCGCTCAT CGCCGCAATA
CTGATCAACA CCGGTCAGCT GCTTGCCGCC GGCTATATTC TCATGCTTGG CCAGTCCATC
CTCGCCCTTA TTGTCGCACT CCTCGTCATC CCGCAGTTCC TTATGCAGTT CAGCCTTGTG
CGTGCCCCGA AAACCATGGA TGTCCGCTAC AACGCCATCG CCCAGAACTT TCTTGTTGCA
GGAATGCTCG TCTGTGCCTT TGCCATAAAA GCCCTCAGAG TATGA
 
Protein sequence
MSDFLSKQQN TKRKQTGSTG TFPRLHVRKT VSQKKRPPET ISRIALLIRF LKPVTWIPVI 
WSFLCGAVAS GAFGWNELFG WKFFLAILLT GPLASGTCQM LNDYFDRDLD EINEPYRPIP
GGAISLKNAT LLIAVWSVLS VITGYLIHPV IGLYVVIGII NAHLYSANPI KLKKRLWAGN
IIVAVSYLVI PWVAGEIAYS SQISLQALMP SLIVAGLFTL SSTGTMTIND FKSVEGDRQN
AIRTLPVVFG ESKAALIAAI LINTGQLLAA GYILMLGQSI LALIVALLVI PQFLMQFSLV
RAPKTMDVRY NAIAQNFLVA GMLVCAFAIK ALRV