Gene Paes_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1386 
Symbol 
ID6458467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1507230 
End bp1508207 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content51% 
IMG OID642725371 
Productprotein of unknown function DUF1568 
Protein accessionYP_002016054 
Protein GI194334194 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGAG GTTCAAGACT CGATGCTCCG GGAACATTGC ATCATGTTAT GGTTCGCGGG 
ATTAATGGTA ACAACATTGT TACGGACGAT GAGGATCGTT CATATTTTAT CTCGCGGCTG
AGTACGGTAT CTGTAGCAAC AGGCACTTCG ATCTATGCCT GGGCTTTGAT GAGCAATCAT
ATTCACCTTC TGTTGAAGAG TGGAGAGATA GGGTTGGCAA CCTTTATGCG AAAGCTGCTG
ACAGGATATG CGATTTACTA CAATCGTCGC CATACTCGCC AGGGCTATGT TTTTCAGAAC
CGCTACAAAT CAATTGTCTG TGAAGAGGAG CGATATTTTC TGAAATTAGT GAGCTACATC
CATCTCAACC CTTTGAGGGC CGGGTTGGTG GAATCTCTGG ATGAACTGGA TCTCTACCCG
TGGAGCGGTC ATGCGGTTGT AATGAAAAAT ATCCGTCAAG AGTGGCAGGA TAGAGCAGCT
GTGTTGCGCT ATTTTGGCGA TGAGGATAGT GCGTGCCGTC ATGAGTACCG GACGTTTGTT
TCTTCAGAGT CCGGTTTGGG CCGTCAGCCT GAATTGACGG GTGGTGGTTT GATTCGTTCC
AATGGCGGGT GGTCGGAAGT GAAGTCTTTG AGGAGACGGG GCGAGAAGGC TTTCAGTGAT
GAGCGGATAT TGGGGAGTAG TGATTTTGTT CGAGAGCTCC TGACGGATGT TGAAGGCGGA
TCGGCAGGGC AGTTGCCGGT AATGCCGTTA GACGAAGAGG CCAAAGAGCG GCTGGAACAG
GCTTGCGCTA ATGCCGGGAT ATCGGTTGAG GTGCTCCAGT CAGGAAGCCG GGTGAAGGGA
TGTTCGGCTT TGCGCAAGGA GCTTGCAGTG GAGTTTGTCA GGGTGCTTGG ATTGTCATAT
GCGGCAACGG CGAGACTGCT TGGGGTGTCT TCATCGGCGG TGAAGCAGAT TTTTTTGCGT
GAGGGTTTGT GTAAATAA
 
Protein sequence
MPRGSRLDAP GTLHHVMVRG INGNNIVTDD EDRSYFISRL STVSVATGTS IYAWALMSNH 
IHLLLKSGEI GLATFMRKLL TGYAIYYNRR HTRQGYVFQN RYKSIVCEEE RYFLKLVSYI
HLNPLRAGLV ESLDELDLYP WSGHAVVMKN IRQEWQDRAA VLRYFGDEDS ACRHEYRTFV
SSESGLGRQP ELTGGGLIRS NGGWSEVKSL RRRGEKAFSD ERILGSSDFV RELLTDVEGG
SAGQLPVMPL DEEAKERLEQ ACANAGISVE VLQSGSRVKG CSALRKELAV EFVRVLGLSY
AATARLLGVS SSAVKQIFLR EGLCK