Gene Paes_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1383 
Symbol 
ID6460730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1504665 
End bp1505087 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content45% 
IMG OID642725368 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002016051 
Protein GI194334191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACATA TAAGAAAAAC GCCTTTAGAA GTACTTGATG ATATATACAA TCTCGCATAC 
TGGATGACAG GAACAGAAGA ACGAACAACA GATCTTGTCA ACAGAACGTA TGTCAATATT
GAGCACAACG CATCCGAAGC TGACATACTG AAAACCTTCA GGGAGTGCTA TGTCGACACC
TACGGTCAAC AGCCCTCTCT GCATATCACA GAAGAGGAGA AACCTGACAA TGTCTCTTTA
CTTACATCCC TCAGTCAAAA AGCTGCTGAT GTAAAACTGA GCGTGCTGCT CTCAGAAATT
TCGGGACTGG GCCATGCACA GATTGCAGAA ATTTTGGGCA GGCCCATCGA AACCATACGT
CAATGGTTGT TCTGGGGCAG AAAATTCATG GCACATGACG GCCAGCTCAA AGCTTCGGCT
TAA
 
Protein sequence
MVHIRKTPLE VLDDIYNLAY WMTGTEERTT DLVNRTYVNI EHNASEADIL KTFRECYVDT 
YGQQPSLHIT EEEKPDNVSL LTSLSQKAAD VKLSVLLSEI SGLGHAQIAE ILGRPIETIR
QWLFWGRKFM AHDGQLKASA