| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1368 |
|---|
| Symbol | |
|---|
| ID | 6460675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1490694 |
|---|
| End bp | 1491635 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642725353 |
|---|
| Product | PSP1 domain protein |
|---|
| Protein accession | YP_002016036 |
|---|
| Protein GI | 194334176 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1774] Uncharacterized homolog of PSP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.901756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGCG ACTATGCGAA AGTGCGTCAG CGTTTGTCCA GGCTTCTTCA TAGTGAGATA
GAGCAGATAT ATGGTGAGTC AGACGAGCAT TCTTCACTTT GCGAGATTGA ACTGAAGTGC
TGCCGTCGGG ATTTTTTCGA CTATACGTCC GGAGAGATGC CTGAGGTAGG TCAGTCTGTC
ATTGTTGAAG CGGATGGCGG TTACGATTAC GGGGTTGTTT ACTCGACAGG AGCCATTGCG
GCAAAAAAAT ATATGCTGAA GGGTCTCGAC AGGAAAGAGA CTAAACGTCT TGCTGTGCTG
AGGATAGCAG GAGAGCCGGA TGAGGCTGAC TACAAGGTGG TTATGCAGAG AGAACCTGAA
ATAAAGGAGA TCTGTGTTTC AAGGATCAAG AAGCATAATC TGGAGATGAA ACTTGTCGAT
ATCGATCTTC GGCTCGATCA GCAGAAAGTG ACGGTGTTTT ATACGTCTGG TCACCGTGTG
GATTTCCGTA ATCTTGTCCG GGACCTTGCA AGCGAGTTTA AAGCCCGGAT ACAGATGGTG
CAGATCACGA CACGCGAAGA GGCCCGTCGG GCAAACAGTT TTGGTGCCTG CGGCTGTATT
CTCTGCTGTT CGAGCTGGAT GCAGAAAATC CATGCCAATC CCTTTGCCGA GAAACAGGAT
GCTGCCGAGT GTGTTCAGGG CGAGCACCAC TCATATAATG TTATCGGCCA GTGCAACCGT
CCGAAGTGCT GTCTTGGTTA TTCAAAGCCA CTGAAAGGGC GCAAAAAAGG CAGGCCTGAA
AAGTATCCCC CGCTCGGCAG TAAAGTAACT ACACCCGAAG GCAACGCGAT TATTGAAGGG
ATTGATCCGG CCAGGAAAGA GATTTTGCTG CGTTACTCCG GTGATGACGC ATTGAAGCAT
ATGTCTCTTG GCGAGTTCAA TACCATGTTC GTGAAAAAAT AA
|
|---|
| Protein sequence | MLGDYAKVRQ RLSRLLHSEI EQIYGESDEH SSLCEIELKC CRRDFFDYTS GEMPEVGQSV
IVEADGGYDY GVVYSTGAIA AKKYMLKGLD RKETKRLAVL RIAGEPDEAD YKVVMQREPE
IKEICVSRIK KHNLEMKLVD IDLRLDQQKV TVFYTSGHRV DFRNLVRDLA SEFKARIQMV
QITTREEARR ANSFGACGCI LCCSSWMQKI HANPFAEKQD AAECVQGEHH SYNVIGQCNR
PKCCLGYSKP LKGRKKGRPE KYPPLGSKVT TPEGNAIIEG IDPARKEILL RYSGDDALKH
MSLGEFNTMF VKK
|
|---|
| |