| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1364 |
|---|
| Symbol | |
|---|
| ID | 6458746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1485871 |
|---|
| End bp | 1487133 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642725347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002016032 |
|---|
| Protein GI | 194334172 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3876] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000043565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.463886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACTTTT ACTCTGAACC GTTACTTTTT CTGGGGATTG ATCGACTCAT GAAACGTGTA
TTGAACGCAT TGCTTTTCTC TTTCTTGCTG TCGCTGCTCT GTTCGACACT CAATGCGGCG
TCGTTCCGCT ATGGGCTTGA TGTTCTTGAT GATGATGCAT GCGCTTTTCT GGAAGGTTCC
AGAGTAGGCC TTATTACCAA TAAGGCTGGT ATCAGCAGTG CCGGTGAATC CAATTACCGC
CTTTTTCTTC GACACGGGGT CGATCTCAGA TTTCTCATGG CTCCTGAGCA CGGATTCAAT
GTTGATGTTG CTGCCGGCGC AACAGTCAGG GATTCCCGTA CGTCCGGTTC GCTGAAAGTA
TATTCCCTGT ACGGGTCTTC GAAAAAACCG GACAGGAATC TTCTCAATAC TATCGATATC
CTTATTTTCG ATCTTCAGGA TATAGGGACC CGTTGCTACA CCTATATTTC TACAATGTTC
TATGCAATGG AAGCTGCTGA AGATGCCGGA ATCAGATTTA TGGTTCTTGA TCGCCCAAAC
CCCATAGCCC CTGTTCCTGC TGACGGGTTT CAGCTTGACC CGGATTGCCG TTCATTCGTG
GGGATTGTTC CGGTGCCTTT TATTCATGCC ATGACGGTTG GTGAGCTTGC TTTATGGATG
AAAAAACATT TCTTCTCGTC GCTTCGTCTC GATGTGATCA GAATGAAGGG GTATGATCGA
CATCTGTTTG CCGATGAACT TCATGGTTTT CGTTTTATTT CACCTTCGCC AAACATTGGC
AGTGTTGAAA CTGCGCTTGT CTATCCTGCC ACGGTTTTTC TCGAAGCAAC CAATATCAGC
GAAGGTCGCG GGACGGATCA GCCGTTCCGG CAGTTCGGTG CTGTCTTTAT CGATTCAGGC
GCATTAAAGC GCGCTCTCGA TGATTTCAGG CTTCCAGGGG TACGTTTTAC TGCGGTTTCG
TTCCGGCCTT CTGCAAGCAA GTATAAGGGG CTTGCATGCA GTGGCGTGAG GCTTGATGTG
ACCGACCGCA TGGTGTTCGA GCCTTTCAGG ACAGGGGTCG CTCTGCTGGT CGCGCTTCAT
ACGCTCTATC CCGGGTTGCT CGATCTGGAA TCGCACGGGG AGTTTTTCGA TAAACTTGCC
GGGACGCCGC TCTTGCGCAG GATGCTTTTG ACCGGCTGCT CCCTTGAGGA GATTCTGGCG
GCTTCGCGTC TTCAGGTTCA TGAGTTTGAG GAGGCTAATC CGCAACGCTT TATCTATCCC
TGA
|
|---|
| Protein sequence | MYFYSEPLLF LGIDRLMKRV LNALLFSFLL SLLCSTLNAA SFRYGLDVLD DDACAFLEGS
RVGLITNKAG ISSAGESNYR LFLRHGVDLR FLMAPEHGFN VDVAAGATVR DSRTSGSLKV
YSLYGSSKKP DRNLLNTIDI LIFDLQDIGT RCYTYISTMF YAMEAAEDAG IRFMVLDRPN
PIAPVPADGF QLDPDCRSFV GIVPVPFIHA MTVGELALWM KKHFFSSLRL DVIRMKGYDR
HLFADELHGF RFISPSPNIG SVETALVYPA TVFLEATNIS EGRGTDQPFR QFGAVFIDSG
ALKRALDDFR LPGVRFTAVS FRPSASKYKG LACSGVRLDV TDRMVFEPFR TGVALLVALH
TLYPGLLDLE SHGEFFDKLA GTPLLRRMLL TGCSLEEILA ASRLQVHEFE EANPQRFIYP
|
|---|
| |