| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1311 |
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| Symbol | |
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| ID | 6458751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1431842 |
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| End bp | 1432834 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725298 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_002015983 |
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| Protein GI | 194334123 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.412273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAG TAAACCTCAA AATTTCATAT GCACCATTTG TTCGATCAAA GGACTCGATC
GAAGCAGTGA TGTATAATGT TGCCCTGGCT CTCGCTCCGG CAACCGTCAT GTCAGTCTAC
CTGTTCGGCA TGAACGCCCT CATCGTCAAC CTGGTCTGTA TCCTGAGCTG CATCGCTTTC
GAGTGGCTGA TGGATACCAT CAGAAAAAAA CCGGCATCAT GCCTTGACGG CAGCGCCCTG
GTAACAGGCC TGCTGCTTGC TTTGAACGTT CCGTCCAATC TTCCCGTCTG GATGCTTGTT
GTCGGTTCAT TCATCGCTAT TGCCGCAGCA AAACATGTCT TCGGAGGACT TGGACACAAT
GTGTTCAACC CCGCACTGGT TGCCAGGGTA TTTCTCCTGG TCTCCTTCCC GGCCGCAATG
ACAAGCTGGC CGGTTCCGGC GCCATTCTCG TTTGACATGA ACGTCGATAT GCCGACTGCT
GCATCGCCGC TCGGCATCCT GAAAACCGAT GGACTTCAGG CATTGGGCTC GTTCAATATT
ATGGACGGCT TTTACGGAAC CATGAACGGC AGCATGGGCG AAACATCCGC GATTGCGTTA
CTGGTCGGTG CCGCATGGCT CTTCTACAAA CGCTATATCA CGATCTACAT TCCGCTCACC
ATGATAGGCT CGGTGTTTAT CTTTACCGGT ATTTTCTACC TGATCGACCC GACATCCTAT
GCATCGCCTC TCTTCCACAT GGTAACCGGC GGTCTGATTC TCGGAGCGTT TTTCATGGCA
ACCGACATGG TGACCTCTCC ACTGTCAGTC CGGGGCCAGA TTCTGTTCGG CCTGGGATGC
GGTCTCCTCA CGGCGATCAT CCGCCTCTGG GGAGGATACC CCGAGGGCGT CTCATTTGCC
ATCCTGATCA TGAACGGTTT TGTTCCGCTG CTTGACGGCT GGGACCTTGC CGACAGAAAA
GCAAAACATC AAAAGAAGTC TGAAACAAAA TGA
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| Protein sequence | MESVNLKISY APFVRSKDSI EAVMYNVALA LAPATVMSVY LFGMNALIVN LVCILSCIAF
EWLMDTIRKK PASCLDGSAL VTGLLLALNV PSNLPVWMLV VGSFIAIAAA KHVFGGLGHN
VFNPALVARV FLLVSFPAAM TSWPVPAPFS FDMNVDMPTA ASPLGILKTD GLQALGSFNI
MDGFYGTMNG SMGETSAIAL LVGAAWLFYK RYITIYIPLT MIGSVFIFTG IFYLIDPTSY
ASPLFHMVTG GLILGAFFMA TDMVTSPLSV RGQILFGLGC GLLTAIIRLW GGYPEGVSFA
ILIMNGFVPL LDGWDLADRK AKHQKKSETK
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