Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1310 |
Symbol | |
ID | 6460285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1430500 |
End bp | 1431825 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642725297 |
Product | electron transport complex, RnfABCDGE type, C subunit |
Protein accession | YP_002015982 |
Protein GI | 194334122 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.643075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAT TCAAAATCGG GGGCGTTCAT CCTCCTGAAA ACAAGTTAAC GGAACATATC GCGATTGAGG TCATGCCCGT TCCCGCAGAA CTGGCAATAT CCTTAAACCA GCATCTCGGC AAACCGGCAA AACCGCTGGT CAAGATGGGT GATGAAGTCC GCAAAGGTCA GCTCATCGGA CAGGCTGACG GGTTCATTTC GGCAAACGTG CACGCAAGCA CAAGCGGAAA GGTAAAAGCT GTCAAACCTC ATCCCCATCC CGGTGGACAG TATGCAATGA CGGTCTTCAT CACGCCTGAC GGCAAAGACG AATGGGCTGA AGGCATGAAC ACCGAACCAG TCGACTGGAA AAAGTTTTCC AGGGAAGAGA TCATTCAGAA AATCAAGGAC GCAGGAATCG TCGGCATGGG CGGCGCCGGC TTTCCCACCA ACGTCAAGCT CTCTCCCCCT CCGGACAAGT CCATCGACAC GATCATACTC AATGGAGCGG AATGTGAACC ATTTCTTACC GCTGATCACC GTCTGATGGT TGAGTACCCG AAAGAGGTCA TCGCCGGCCT TGACATCATC GCATCGCTCT TCAGAGGAGA AGCAAAGTCG TTCATCGGGA TCGAATCGAA CAAACAGGAT GCCATCGATA CATTGAAAAA ACATGCCGCA GCATCAGGTA TTGAAGTCGT TTCGTTAAAA ACAAAGTATC CTCAGGGCGC AGAAAAACAG CTTATCAATG CCATCACCGG CCGGACCATC GAAGAAGGTG AACTGCCGTT CGACAAAGGC TGCCTGGTTC AGAACATCGG TACAGCCGTA GCGATCTACG AAGCTGTCTG TATGAACAAA CCGCTCATCG AACGAGTACT GACCGTCTCG GGTATGGAAA TTGGTCAGCG AAAGAACATC ATGGCCCGCG TCGGAACCAC CTTCAAAGAT CTCATTGCCT TCTGCGACAA CATGTCGGCA AAAACAAACC AGATCATCTC CGGTGGACCG ATGATGGGAA AAGCGATTTT CTCGCTTGAT GTCCCTGTCG TTAAAACCAC TTCAGGAATT CTGTTTCTCA ATAATACTGC TCTTGAAAAG TCAAAAGAAC GAACCTGCAT CCGCTGCGGA AAATGCGTCG ACGTCTGCCC TCAGGGACTT GGCCCATGGC TCCTTGCCAA TGTCGCTCAG ATGAGAGAGT TCGACGATAT TCAGCTGTAC GGTCTTGCCA ACTGCACAGA GTGCGGCAGC TGCACCTTCG TCTGCCCCTC AAAGCGCGAG CTCGTTCACT GGATCAAATA CGCCAAGGCA CTCGTCAATA ATCGCCAAAA ACGCAAATCA GCTTAA
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Protein sequence | MKTFKIGGVH PPENKLTEHI AIEVMPVPAE LAISLNQHLG KPAKPLVKMG DEVRKGQLIG QADGFISANV HASTSGKVKA VKPHPHPGGQ YAMTVFITPD GKDEWAEGMN TEPVDWKKFS REEIIQKIKD AGIVGMGGAG FPTNVKLSPP PDKSIDTIIL NGAECEPFLT ADHRLMVEYP KEVIAGLDII ASLFRGEAKS FIGIESNKQD AIDTLKKHAA ASGIEVVSLK TKYPQGAEKQ LINAITGRTI EEGELPFDKG CLVQNIGTAV AIYEAVCMNK PLIERVLTVS GMEIGQRKNI MARVGTTFKD LIAFCDNMSA KTNQIISGGP MMGKAIFSLD VPVVKTTSGI LFLNNTALEK SKERTCIRCG KCVDVCPQGL GPWLLANVAQ MREFDDIQLY GLANCTECGS CTFVCPSKRE LVHWIKYAKA LVNNRQKRKS A
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