Gene Paes_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1305 
Symbol 
ID6458579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1424844 
End bp1426109 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content49% 
IMG OID642725292 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002015977 
Protein GI194334117 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT CCCCTTTGGT CATATTGTTT TTAACGGTCC TGCTCGACCT GATCGGGTTC 
GGCATCGTCC TGCCGCTACT TCCGACCTAT GCCAAAGATC TTGGCGCCTC ACCGTTGATG
ATCGGCTTTA TAGCCGCTGT CTACTCGAGC ATGCAATTTA TTTTTTCCCC TCTATGGGGC
AAGCTCAGTG ACGTTATCGG CCGCAGACCG GTCATGCTGG GCAGCATATT GCTCGCGTCC
ATCTCCTATG TCTTTTTCTC CCAGGCGACA ACCATTCCGC TGCTTATTCT GGCAAGAGGC
ATGTCAGGAA TGGGCTCTGC CAATATCGCT GCCGCTCAGG CCTACATCAC CGACGTGACC
GACAGTCAGG GCCGGTCGAA AGCCATGGGA ATGCTCGGTG CCGCCTTCGG GATCGGCTTT
ATCATCGGTC CGCTGATCGG AGGGTTTCTG AAAACCAATT TCGGCATTGA AATGGTCGGT
CTTGTTGCTG CTGCGCTGAT CGGTATCGAT TTCATTCTGG CTATTTTTTT CCTGCCGGAG
TCCAACAAGG AAGCAATAAA AATCTCTCAG CTCTTCACCC AAAAAGCCAT ATCCGGACCT
CGTCAGTCCG TTGTCGCGCT TGTCTCGTCA AAAGTATCAG ACTATACGCA GAGCGTCAAC
GACGCCTTCA GTTCCAGACC GATTGCCATG CTGATGACCA CCAATTTCAT TTTCACCTTC
GGCATCGTCA ACATGCAGAT TGCCTCTATC CTGCTCTGGA AAGAGTTCTA CCTTACCTCA
GACCAGCAGA TCGGGTACCT CTTTGCATAT GTAGGATTTC TCTCGGTGAT CGTTCAGGGG
GGACTTATAG GAAAACTCAA CAAAATACTG GGTGAACATA AACTGTTTAC CTGGGGACAC
ATTTTATCAT TTATCGGTGT TTTTTTCATC CCCTTTGTTC CTCAGAGTAA TCTTTTCAGT
ATCGGGCTGT TCATACTGTT TTTTTTTGCA ATGGGAACCA GTCTGGTCAA TCCGATCAAT
ATTTCGATGA CCTCGCTCTA CAGCTACAAC AAGAAACAGG GGCAAATCAT GGGGCTGGCC
CAATCGGTCA ATTCATTTGC CAGGATTCTC GGTCCTTTCA GCGGCAGTAT TCTTTACGGC
ATCAATCATA AAACACCATT TATTGTTGCA GGGATCCTCA TGATCATCGG AACCGTTATT
TCTCTCGGCC TGTTCAAATA CGACATAGAA GCACTCGAAC CCGCCGCTGA GTCCGTCAAC
GCGTAA
 
Protein sequence
MKKSPLVILF LTVLLDLIGF GIVLPLLPTY AKDLGASPLM IGFIAAVYSS MQFIFSPLWG 
KLSDVIGRRP VMLGSILLAS ISYVFFSQAT TIPLLILARG MSGMGSANIA AAQAYITDVT
DSQGRSKAMG MLGAAFGIGF IIGPLIGGFL KTNFGIEMVG LVAAALIGID FILAIFFLPE
SNKEAIKISQ LFTQKAISGP RQSVVALVSS KVSDYTQSVN DAFSSRPIAM LMTTNFIFTF
GIVNMQIASI LLWKEFYLTS DQQIGYLFAY VGFLSVIVQG GLIGKLNKIL GEHKLFTWGH
ILSFIGVFFI PFVPQSNLFS IGLFILFFFA MGTSLVNPIN ISMTSLYSYN KKQGQIMGLA
QSVNSFARIL GPFSGSILYG INHKTPFIVA GILMIIGTVI SLGLFKYDIE ALEPAAESVN
A