Gene Paes_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1285 
Symbol 
ID6458621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1402708 
End bp1403748 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content59% 
IMG OID642725272 
Productperiplasmic binding protein 
Protein accessionYP_002015957 
Protein GI194334097 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT TTCTCACTCC CCTGGCTGCA ATGCTGCTGC TGTTGACGAT ATCCTCCTGC 
TCACCTCCGG CCCCATCCGG GAGTAAGGAT GCCCGCACCA TCACCGACAT GGCCAAGAGG
AGCATGACCG TTCCGAAGAC CATCACGAAG GTCTACGTCA ACCGCCCGGG AAGCATCCTC
CTGTACGCCA TCGATCCGGA GCTGATCGTC AACCGCTCGT TCAATTTCAC GCCCGAAGCC
GCCCGATTTC TTTCGGAAGA CTACCTGGCG CTGCCCCATA CCGAGGGATC AGCCGAGGAA
ATCCTGAAGC TCGCTCCTGA CCTTATCCTC ACGTTTTTCG ACATCAATGC CGGCTCGATC
GACGAGGCGG ACAAGCTCGC CGAAAAAACC GGCATCCCGG TCTATCTCGC CTCACTGACC
CTTGAGGACT ACCCGGAGGT ATTCAGGCGC CTGGGCAGGC TGCTCGACCG CGAGGAGCAG
ACGAACCGCA TGCAGGATTT TATCGACAAG CACGTGGACC CGGTCCTCGA GCAGGCGCAG
AGCATCGACA AACAGGACAG GATGAGCGTC TACTACGCAG AAGGAGACCG CGGGCTGCAT
ACCGATCCTG CAGGATCGCT GCACAGCAGG CTGATCACGA TGACCGGAGG CATCAACGCC
GCCGACATCG ACGCGGTCAG CCGGAAAGGG CTGAGCGAGG TCTCGATGGA GCAGCTACTC
ATGTGGGATC CGGATATCGT CCTGGTCTGG GCCGGACTTG GAAAAATCAC ACCGACCATG
GCACATATCC AGAACGACCC GATCTGGTCA CGTCTCCGGG CAGCACGAAA CGGCCGGATC
TACCAGATCC CCTACCTGCC TTATGGCTGG TTCGACCGTC CGGCAAGCAT CAACCGGCTG
CTCGGCATTC CGTGGCTGGC TGACCTGCTC TACCCTGATG TCTACGACAT CGACATCGAC
GCGGTTGTCG CAGAGTACTT CAAAACCTTC TACCACGACG AACTGAGCAG CGAAGAGGCT
CAAGCACTGC TGAACCCATG A
 
Protein sequence
MKTFLTPLAA MLLLLTISSC SPPAPSGSKD ARTITDMAKR SMTVPKTITK VYVNRPGSIL 
LYAIDPELIV NRSFNFTPEA ARFLSEDYLA LPHTEGSAEE ILKLAPDLIL TFFDINAGSI
DEADKLAEKT GIPVYLASLT LEDYPEVFRR LGRLLDREEQ TNRMQDFIDK HVDPVLEQAQ
SIDKQDRMSV YYAEGDRGLH TDPAGSLHSR LITMTGGINA ADIDAVSRKG LSEVSMEQLL
MWDPDIVLVW AGLGKITPTM AHIQNDPIWS RLRAARNGRI YQIPYLPYGW FDRPASINRL
LGIPWLADLL YPDVYDIDID AVVAEYFKTF YHDELSSEEA QALLNP