Gene Paes_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1217 
Symbol 
ID6458948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1326666 
End bp1327697 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content50% 
IMG OID642725207 
ProductNmrA family protein 
Protein accessionYP_002015892 
Protein GI194334032 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000104302 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000138071 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCGCTC AATCTTCTTC TGAAATCTCG TCTGCAGCAC AACCGAAACG CGTTTTTGTC 
GTCGGGGCTA CAGGCTATAT CGGCAAATTC GTCGTTCGAG AACTGGTGGC CCGGGGATAT
GATGTCGTGA GTTTTTCGCG TGAGCGTTCA GGCGTCGGTG CATCGACAAC GGCAGATGAG
ACTCGTCGCG AACTCAAGGG TTCCGAGGTT CGTTTCGGTG ATGTAAGCAA TCCTGATTCT
CTGGTGAAGC AGGGGATTTG CGGAGAGCAT TTCGATGTTG TCGTTTCATG TCTGACCTCC
AGGACGGGTG GCGTCAAAGA TGCGTGGAAT ATCGACTACC AGGCTACTCG CAATGTTCTT
GACGCCGCTC TTCTTGCAGG AGCATCTCAA TTTGTTCTTC TTTCGGCTAT CTGCGTCCAG
AAACCACTGC TTGAGTTTCA GCGGGCAAAA CTGAAGTTTG AAGAAGAACT TCAGCGCTCC
GGTCTGATCT ATTCCATCGT TCGTCCGACT GCGTTTTTCA AGTCTATAGC AGGGCAGGTT
GAGGCTGTCA GGAAGGGTAA GCCGTATGTG ATGTTCGGCA ACGGTGAACT GACGGCCTGC
AAGCCTATCA GTGAGGCTGA TCTGGCCCGC TTTATGGCTG ATTGTCTTGA AGACGCCTCG
AAGCAGAACA GGATTCTTCC GATCGGAGGC CCGGGGAAAG CCATTTCAGC AAGAGAGCAG
GGTGAAATGC TTTTTGAGCT GCTTGGACGG GAACCGAAAT TCAAAAATAT GCCGATCAGG
ATGTTCGATG TGATTATTCC TGTGTTGAGC TTCCTGTCAA AGATTTTCCC GAAACTTGAA
GATAAAGCAG AGTTTGCCAG GATCGGAAAG TACTACTGTT CGGAATCGAT GCTTGTGCTC
AATCCCCATA CCGGAAAATA TGATGCTGAC ATGACTCCTT CTTACGGCAG CGATACGCTC
AGGGATTTTT ATACACGTGC TCTGAAGGAA GGACTTTCCG GCCAGGAACT CGGCGATCAT
GCGATGTTTT AG
 
Protein sequence
MSAQSSSEIS SAAQPKRVFV VGATGYIGKF VVRELVARGY DVVSFSRERS GVGASTTADE 
TRRELKGSEV RFGDVSNPDS LVKQGICGEH FDVVVSCLTS RTGGVKDAWN IDYQATRNVL
DAALLAGASQ FVLLSAICVQ KPLLEFQRAK LKFEEELQRS GLIYSIVRPT AFFKSIAGQV
EAVRKGKPYV MFGNGELTAC KPISEADLAR FMADCLEDAS KQNRILPIGG PGKAISAREQ
GEMLFELLGR EPKFKNMPIR MFDVIIPVLS FLSKIFPKLE DKAEFARIGK YYCSESMLVL
NPHTGKYDAD MTPSYGSDTL RDFYTRALKE GLSGQELGDH AMF