Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1217 |
Symbol | |
ID | 6458948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1326666 |
End bp | 1327697 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725207 |
Product | NmrA family protein |
Protein accession | YP_002015892 |
Protein GI | 194334032 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000104302 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000138071 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGCGCTC AATCTTCTTC TGAAATCTCG TCTGCAGCAC AACCGAAACG CGTTTTTGTC GTCGGGGCTA CAGGCTATAT CGGCAAATTC GTCGTTCGAG AACTGGTGGC CCGGGGATAT GATGTCGTGA GTTTTTCGCG TGAGCGTTCA GGCGTCGGTG CATCGACAAC GGCAGATGAG ACTCGTCGCG AACTCAAGGG TTCCGAGGTT CGTTTCGGTG ATGTAAGCAA TCCTGATTCT CTGGTGAAGC AGGGGATTTG CGGAGAGCAT TTCGATGTTG TCGTTTCATG TCTGACCTCC AGGACGGGTG GCGTCAAAGA TGCGTGGAAT ATCGACTACC AGGCTACTCG CAATGTTCTT GACGCCGCTC TTCTTGCAGG AGCATCTCAA TTTGTTCTTC TTTCGGCTAT CTGCGTCCAG AAACCACTGC TTGAGTTTCA GCGGGCAAAA CTGAAGTTTG AAGAAGAACT TCAGCGCTCC GGTCTGATCT ATTCCATCGT TCGTCCGACT GCGTTTTTCA AGTCTATAGC AGGGCAGGTT GAGGCTGTCA GGAAGGGTAA GCCGTATGTG ATGTTCGGCA ACGGTGAACT GACGGCCTGC AAGCCTATCA GTGAGGCTGA TCTGGCCCGC TTTATGGCTG ATTGTCTTGA AGACGCCTCG AAGCAGAACA GGATTCTTCC GATCGGAGGC CCGGGGAAAG CCATTTCAGC AAGAGAGCAG GGTGAAATGC TTTTTGAGCT GCTTGGACGG GAACCGAAAT TCAAAAATAT GCCGATCAGG ATGTTCGATG TGATTATTCC TGTGTTGAGC TTCCTGTCAA AGATTTTCCC GAAACTTGAA GATAAAGCAG AGTTTGCCAG GATCGGAAAG TACTACTGTT CGGAATCGAT GCTTGTGCTC AATCCCCATA CCGGAAAATA TGATGCTGAC ATGACTCCTT CTTACGGCAG CGATACGCTC AGGGATTTTT ATACACGTGC TCTGAAGGAA GGACTTTCCG GCCAGGAACT CGGCGATCAT GCGATGTTTT AG
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Protein sequence | MSAQSSSEIS SAAQPKRVFV VGATGYIGKF VVRELVARGY DVVSFSRERS GVGASTTADE TRRELKGSEV RFGDVSNPDS LVKQGICGEH FDVVVSCLTS RTGGVKDAWN IDYQATRNVL DAALLAGASQ FVLLSAICVQ KPLLEFQRAK LKFEEELQRS GLIYSIVRPT AFFKSIAGQV EAVRKGKPYV MFGNGELTAC KPISEADLAR FMADCLEDAS KQNRILPIGG PGKAISAREQ GEMLFELLGR EPKFKNMPIR MFDVIIPVLS FLSKIFPKLE DKAEFARIGK YYCSESMLVL NPHTGKYDAD MTPSYGSDTL RDFYTRALKE GLSGQELGDH AMF
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