| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1171 |
|---|
| Symbol | |
|---|
| ID | 6459970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1280535 |
|---|
| End bp | 1281140 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642725162 |
|---|
| Product | outer surface protein, putative |
|---|
| Protein accession | YP_002015847 |
|---|
| Protein GI | 194333987 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0200976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.389848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAA AACTCTTGTC AGGACTCACT TGCAGTTGTT GTGCTATTGT TTTTTTTCAA
TCCGCATACG CAGGCTCTCC ATACGCAGGG TTGACCGTCG GGAAGGCCTA TCTCAACAAT
TCGAGCATAA AAGGTTCTAA CCGGGAGTAC TCCTGTGATG ACGGAGAAGG GTACTGTTAT
GCTCACGGGC TGGAATTAGG GAATTTCAGG CTGGAAGGAG AGATCGGCTA TCAGAAAAAC
GATTTCGATG CCATCGAGCC TGGAGTCCGG ACAGCAAACG GTGACCTTTC GATTCTTTCT
CTTCTTGGTA ACGGGTATTA CTCGTTAAGT GCTCAGGGGA GCCGAGTTAT GCCGGTTATC
AGTGCGGGTG TGGGCGTGGC AAACATCGAG TTTGAGGATG AAGTGAACGC TGTTGATGAT
TCAGATCTGG TTCTCGCTTA TCAGGTCGGG GCCGGTCTGG GTTACAAGCT TTCCGAATCG
GTTACGGTGA CCACCATGTA CCGCTATTTT TCTACCTCCG ATGCCGGGTT CGATGAAGAG
GCCGACGATC TTCATGTCGA TATTTCGAGT CATAATATCA TGATGGGCGT TAAGGTAAAC
TTCTGA
|
|---|
| Protein sequence | MSRKLLSGLT CSCCAIVFFQ SAYAGSPYAG LTVGKAYLNN SSIKGSNREY SCDDGEGYCY
AHGLELGNFR LEGEIGYQKN DFDAIEPGVR TANGDLSILS LLGNGYYSLS AQGSRVMPVI
SAGVGVANIE FEDEVNAVDD SDLVLAYQVG AGLGYKLSES VTVTTMYRYF STSDAGFDEE
ADDLHVDISS HNIMMGVKVN F
|
|---|
| |