| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1105 |
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| Symbol | |
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| ID | 6458667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1212183 |
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| End bp | 1214918 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642725100 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002015785 |
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| Protein GI | 194333925 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGG AAAAAAAGGA TTTTTTCATC AGCTATACCG GAGCCGACCA GCAGTGGGCC
GAGTGGATCG CCTGGCAGCT TGAAAAGGCT GGATATACAA CTGTGCTGCA AGCCTGGGAT
TTTCATGCAG GTTCCAACTT TGTACAGGAC ATGCAAGCGG CATTGGAAAA GGCACAGCGT
ACTATTGCTG TTCTTTCGCC ACGATATCTG CAATCAGCGT ACGCACGGGC TGAATGGTCT
GCTGTTTTTG CTGAAGATCC CACAGGAGAA AAAGGAATAC TCATTCCTGT TCGCATCGAG
CCCTGTGAGC TCAAAGGCCT GCATAAAGCG ATTGTCTATA TCGACCTTGT TCGGAAAGAG
AGAAAAGACG CACAAGCATT TCTGCTTAAG GAACTCCAGC ATGTACTTGA AAAAAGCCGT
CGCAAACCGA AACAGGAACC AGGCTATCCT GGAGAATTCA AGCCAGAACC GAGATACCCT
GGTTCCCTTC CCGATGTCTG GAACATTCCC CGTCGAAACC CGAACTTCAC CGGACGTGAT
CAACTGCTCC AGGATCTTCA TGCTTCACTG ACTGACGGCA ACCATACGGC GCTCACCCAG
CAGGCACTCC ATGGGTTGGG AGGTATCGGC AAATCACAGC TGGCAATCGA ATACGCGTAT
CGATACAGTA CATCCTATGC TCATGCATGG TGGATACGTG CAGAAGAAGA CGCAAGTATC
ATCACTGATT ATGCCGCTCT GGCAACAGCA TTGCAGTTGC CGGAAAAAGA TGCCGAAGAG
CAGACGGTTA TCATCGAAGC CGTACGCAGA TGGCTCAATA CGCATCATGG CTGGCTTCTG
GTTTTCGATA ATGCCCGAGA TGCAGCAAGT ATTCGCCACT ATCTGCCGGA CAGCACAGGG
GGGCGTGTGC TCATCACCTC CCGCAATCCT GACTGGAGAA CCATCGGCAG GCCGCTGCAG
GTAACGGTCT GGGAACGCTA TGAATCCATC GCGTTTCTGA AACAGCGAAC CGGCCAGGAT
CAGCAAGAAA ACAGGGATGC CAACGAACTG GCTGATGAGC TTGGTGATCT GCCCCTGGCC
CTCGAACAGG CCGCCGCCTT TATCGAGAAG CGGCATATCA CGATAAGCGA GTACCTGAAA
CTGTATCGTA CGCGCCGCAA GGATCTTCTG GACAGAACGA AGCCCTCTGA CGATTATCCC
GATACGATCG CTACGACCTG GGTGATGGCG TTCGAGGCCA TCAGGGATGT TCCTTTGGCC
AGTGACCTGC TGTTCTTCAG CAGCATCATC GCACCCGATG CGATCCCCAA AGATCTGATC
AAACAGGCGC TGGAACAGCG TGTTGATGAT CAGGACCATG AAGAACAATC GATCGATGAA
CTCGATTTTC ACGATACCAT CGATGCCCTC TGTTCGTATT CACTGATCAG CCCTGACACC
GACACCTTTT CCATCCATCG CCTGGTGCAG GCCGTAACCC AGGACAGGAT GGGGCCGGAA
GCAATGGCTC ACTACAGAAA GGAGATGCTC CAGTCCCTTC TGGCCCTGTT TCCCCAAGAA
GGCTACAACA CGCCATCATG CTGGCCGTTA TGCGCACAAC TGCTCCCTCA TGCGGAAAAG
ATCATGGAAA TAAGCGAGCC ATCGGTAAGC ATGGCATCAT TGTTGAACAA CATGGGGAGC
TACTATCATG GGCGCGCCTC ATATGCGCAA GCCGAGCCGC TGTACCGCCG CGCGTTGGGG
ATTGATGAAA AAGCGTTGGG ATTGGAACAT CCGTATGTTG CGACGAGCCT GAACAATCTG
GCGGGATTGC TGTATGCGCA GGGAAAGTAC GGAGAAGCCG AGCCGCTGTA CCGCCGCGCG
CTGTTGATCA GGGAAGAGCA GCTGGGAGGA GAACATCCGT ATGTTGCGAC GAGCCTGAAC
AATCTGGCGG GATTGCTGAA AGCGCAGGGA AAGTACGGAG AAGCCGAGCC GCTGTACCGC
CGCGCGTTGG GGATTGATGA AAAAGCGTTG GGATTGGAAC ACCCCGAAGT GGCAACTGAT
CTGAACAATC TGGCGGGATT GCTGTATGCG CAGGGAAAGT ACGGAGAAGC CGAGCCGCTG
TACCGCCGCG CGCTGTTGAT CAGGGAAGAG CAGCTGGGAG GAGAACATCC GTATGTTGCG
ACGAGCCTGA ACAATCTGGC GGAATTGTAT CGGGCGCAGG GAAAGTACGG AGAAGCCGAG
CCGCTGTACC GCCGCGCGCT GTTGATCAGG GAAGAGCAGC TGGGAGGAGA ACATCCCTCT
GTTGCGACGA GCCTGAACAA TCTGGCGGTA TTGCTGTATG CGCAGGGAAA GTACGGAGAA
GCCGAGCCGC TGTACCGCCG CGCGCTGGGG ATTGATGAAA AAGCGTTGGG ATTGGAACAC
CCCGAAGTGG CAACTGATCT GAACAATCTG GCGGGATTGC TGTATGCGCA GGGAAAGTAC
GGAGAAGCCG AGCCGCTGTA CCGCCGCGCG CTGTTGATCA GGGAAGAGCA GCTGGGAGGA
AAACATCCGG ATGTCGCCCA GAGCCTGAAC AATCTGGCGG GATTGCTGGA TGCGCAGGGA
AAGTACGGAG AAGCTGAGCC GCTGTACCGC CGCGCACTGG GGATATGTGA GCAGTCATTA
GGAGCATCGC ATCCGAATAC GATCACGATG CAGAACAACC TGGAAGTGCT GCTTGAGAAA
ATGAAGGATT CGGGTGATAG GGAGAAGAAA TCATAG
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| Protein sequence | MDQEKKDFFI SYTGADQQWA EWIAWQLEKA GYTTVLQAWD FHAGSNFVQD MQAALEKAQR
TIAVLSPRYL QSAYARAEWS AVFAEDPTGE KGILIPVRIE PCELKGLHKA IVYIDLVRKE
RKDAQAFLLK ELQHVLEKSR RKPKQEPGYP GEFKPEPRYP GSLPDVWNIP RRNPNFTGRD
QLLQDLHASL TDGNHTALTQ QALHGLGGIG KSQLAIEYAY RYSTSYAHAW WIRAEEDASI
ITDYAALATA LQLPEKDAEE QTVIIEAVRR WLNTHHGWLL VFDNARDAAS IRHYLPDSTG
GRVLITSRNP DWRTIGRPLQ VTVWERYESI AFLKQRTGQD QQENRDANEL ADELGDLPLA
LEQAAAFIEK RHITISEYLK LYRTRRKDLL DRTKPSDDYP DTIATTWVMA FEAIRDVPLA
SDLLFFSSII APDAIPKDLI KQALEQRVDD QDHEEQSIDE LDFHDTIDAL CSYSLISPDT
DTFSIHRLVQ AVTQDRMGPE AMAHYRKEML QSLLALFPQE GYNTPSCWPL CAQLLPHAEK
IMEISEPSVS MASLLNNMGS YYHGRASYAQ AEPLYRRALG IDEKALGLEH PYVATSLNNL
AGLLYAQGKY GEAEPLYRRA LLIREEQLGG EHPYVATSLN NLAGLLKAQG KYGEAEPLYR
RALGIDEKAL GLEHPEVATD LNNLAGLLYA QGKYGEAEPL YRRALLIREE QLGGEHPYVA
TSLNNLAELY RAQGKYGEAE PLYRRALLIR EEQLGGEHPS VATSLNNLAV LLYAQGKYGE
AEPLYRRALG IDEKALGLEH PEVATDLNNL AGLLYAQGKY GEAEPLYRRA LLIREEQLGG
KHPDVAQSLN NLAGLLDAQG KYGEAEPLYR RALGICEQSL GASHPNTITM QNNLEVLLEK
MKDSGDREKK S
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