Gene Paes_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1087 
Symbol 
ID6459754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1196775 
End bp1197566 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content48% 
IMG OID642725084 
Producthypothetical protein 
Protein accessionYP_002015769 
Protein GI194333909 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATC TGCCTGTCGA GATCAGCTTC TGGCAGCTGC TGCTGGGCCT CGTTTTTATC 
TTTATCGCCC AGATAACCTC ATTACTGTAC CATCTGGGAT TGAATCGCGA TATTACCGTA
GGAACGATCC GTACCTTTGC CCAGCTCTTT TTGATGGGGT ATGTTCTCAC CTTTATTTTT
CAGCTTGAAA ACGTATGGCT GACACTGTTG GTATTCAGTA TCATGGTTAT TTCAGCATCG
TTTATCGTCA AGGGACGGGT CAGGGAGAAA CGTATTCCAT ACCTTTTGCC GACTATTCTG
ACGATGTTTA TCAGCTATTT CGCAACGGCT TTTTTCGTAT CGGGTATCAT TATCGGAGTC
GATCCCTGGT GGGAGCCCCG CTATTTTCTG CCATTTGGGG GTATGGTCAT CGGTAATTCG
ATGTCTGCTC TTGCTATTGC CATTGAACGT CTCTTCAGTG AGATGCGTCA GCAGAAAAAC
ATGATCGAAG CCCGCCTTTG CCTGGGAGCG AACTACAAGG AAGCGAGCGC TGAGATGTTG
AGAAACGCAA TCTCAGCAGG TATGATCCCG TCGATCAATG CGATGATGGG CGTCGGTCTT
GTGTTTATAC CCGGAATGAT GGCGGGTCAG GTTCTTGCAG GGGCGGACCC TTTACAGGCA
GTCCGTTATC AGATTGTCAT TATGCTGATG CTTGTCGGAT CGACAGCGAT GACGTCCTTT
ATTACGATTC GCATTATCCG TAAACGGTGT TTTGGAAGGG GAGAGGAACT ACTGCTTTCT
TTGTCCCGCT AA
 
Protein sequence
MNNLPVEISF WQLLLGLVFI FIAQITSLLY HLGLNRDITV GTIRTFAQLF LMGYVLTFIF 
QLENVWLTLL VFSIMVISAS FIVKGRVREK RIPYLLPTIL TMFISYFATA FFVSGIIIGV
DPWWEPRYFL PFGGMVIGNS MSALAIAIER LFSEMRQQKN MIEARLCLGA NYKEASAEML
RNAISAGMIP SINAMMGVGL VFIPGMMAGQ VLAGADPLQA VRYQIVIMLM LVGSTAMTSF
ITIRIIRKRC FGRGEELLLS LSR