Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1079 |
Symbol | |
ID | 6459604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1188555 |
End bp | 1189814 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642725076 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002015761 |
Protein GI | 194333901 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000107767 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACCCG AGTTATATAT AGCAAGGCGC TTTGCCTTTA AGCAACGATC GACATCCAAA CCAACATTTA TCGTCATGAT CGCCGTGACC GGTATTGCGG TTGGTACGAC CGCACTGATC CTGACATTGT CGATTGTCAA GGGGTTTTCG GTCAAGATCG AAGAAAAACT GGTAGCCTTC AGTTCCCATA TGCAGGTTCG CCAGTCCGAC GGTCGGCTGT TTTATCCGCT CGATGCAGAT ACCCGTCGTC TGAGTCATAT CGACAATGTG CTCTCGATTA CCCCTTTTAT GGAGAAAAAT GTCATTCTTC AGAGCAGGAA AGGCAAAAAA ACCCTTATTC AGCCGGCCAT GCTGAAAGGC TTCAATGCCG CAGAGACTCC GGACTTTTTG CGCGAGAGTA TTGTTGACGG GGAATCGATT GCAGAAAGCG GCGGGAACAA TCTCGATATC CTGGTAGGAA GCTCTCTTGC CGAAACGCTT GATATCGGAC CAGGCAGCAG GGTTCTGGTG ATCAGTACCT CGAAACAGGC GACAGGTGCT TTGCTGGCTG GAAGCGATAC GATCGTTGAT CTTCTTTCAA ACATGGATCT TGAACTTGCT ACGGTAAGGG GAGTCTATGA AACCGGTCTG AATGAAGGGT TTGATGATTA TATGGTCATC GCTGATCTTG GTGCGCTGCA AAAGCATTTT CATCCGTCAC GCATAAGCGG TTATGAAATC ATGGTCAACG ACCTGGCTCG TCTCAATGAA ACCACCAGGG CCGCAGCAGA TACGCTTGGC TATCCCTTTT ACAGTTATAC TGTCTATGAG CGTTATGCAA ATCTGTTTGA ATGGCTGAAG CTGCAGCAGA ATATTACCCC GCTGTTGATC ATTACCATTA CGATTGTCGC TGTTTTTAAT ATCATATCAA CGCTTCTGGT GCTGATTATC GAAAAAACCC GTGAGATAGG GATGCTTATG GCGCTGGGGC TTGGACCATC AAAGCTCAGC AGCATTTTTC TTTCACAGGC TTTTTTGATT GCTCTGATAG GTATTGCTTT AGGCAATCTT CTCGCTCTGG GGTTTTCGGT ATTCGAACTG CATTTTCATC TGATTTCTCT TCCTGAAAAG AACTATTTCA TCAAACATGT TCCGATATTG ATCGACTTCC GGGATTATCT GCTTGTTTCT GCTGTGGTCG CATCGCTTTC GCTGCTCTTC GCGTTCATTC CAGCGCGGGT TGCGGCATCG CTCAAGCCGG GAACCGCACT TTTGACATGA
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Protein sequence | MKPELYIARR FAFKQRSTSK PTFIVMIAVT GIAVGTTALI LTLSIVKGFS VKIEEKLVAF SSHMQVRQSD GRLFYPLDAD TRRLSHIDNV LSITPFMEKN VILQSRKGKK TLIQPAMLKG FNAAETPDFL RESIVDGESI AESGGNNLDI LVGSSLAETL DIGPGSRVLV ISTSKQATGA LLAGSDTIVD LLSNMDLELA TVRGVYETGL NEGFDDYMVI ADLGALQKHF HPSRISGYEI MVNDLARLNE TTRAAADTLG YPFYSYTVYE RYANLFEWLK LQQNITPLLI ITITIVAVFN IISTLLVLII EKTREIGMLM ALGLGPSKLS SIFLSQAFLI ALIGIALGNL LALGFSVFEL HFHLISLPEK NYFIKHVPIL IDFRDYLLVS AVVASLSLLF AFIPARVAAS LKPGTALLT
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