Gene Paes_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1039 
Symbol 
ID6459996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1141756 
End bp1142475 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content52% 
IMG OID642725039 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_002015725 
Protein GI194333865 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00664745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000693547 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTCTTA TTCCAGCCGC CACACTCGCC CCGTCATCGA TCTACTGTGT AGGAAAAAAC 
TATGAAGATC ATGCCAGAGA AATGCTGAAA TGGGACGGGG GCACAACGCT CCCGCCCCTG
AATGAGTCTG ACCCCATTAT CTTTCTCAAA CCCGTTTCAG CTCTTACGCC TGACTACAGA
ACATCGATCC CCTGTATCGA ACAGCAACCG GTATCGCACC TTATGCATTA CGAAGCCGAA
CTGGTGCTCC TCATTGGAAA GGATGCAGAG CAAATAGGGC TCGACGAAGC GCCCCGATAT
ATTCAAGGCT ACGGTGTCGG TCTTGACATG ACACTGCGCG ACGTCCAGCA GCAGGCCCGA
CAAAAAGGAG AGCCATGGCT GAAAAGCAAA GGTTTCCGTC AAAGCGCTAT GGTCTCGGAT
ATCATAACCG CTGAAGATGC CGGAGATCCG GCCTCTCTTG GTTTTTCTCT CATCCTGAAC
GGCAAAAAAG TCCAGCAGGG GGCGGCAAAC CAGATGATAT TCAATCCCTT TCATCTTATT
TCCTATCTTT CATGGATATA TGGTTTGCGC CGGGGAGACC TTCTGTTTAC CGGCACACCG
GCAGGCGTCG GACCGGTTGA ACCGGGTGAT CGCCTCGAAG CGATTCTGGA ACAAACACAT
AACGGGGCCG CAACAGCCCT GACGCATTTC GAAGCAACAA TCCATGAACC CGGCACATAA
 
Protein sequence
MPLIPAATLA PSSIYCVGKN YEDHAREMLK WDGGTTLPPL NESDPIIFLK PVSALTPDYR 
TSIPCIEQQP VSHLMHYEAE LVLLIGKDAE QIGLDEAPRY IQGYGVGLDM TLRDVQQQAR
QKGEPWLKSK GFRQSAMVSD IITAEDAGDP ASLGFSLILN GKKVQQGAAN QMIFNPFHLI
SYLSWIYGLR RGDLLFTGTP AGVGPVEPGD RLEAILEQTH NGAATALTHF EATIHEPGT