Gene Paes_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1019 
Symbol 
ID6460199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1120695 
End bp1121549 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content49% 
IMG OID642725018 
Productbeta-lactamase domain protein 
Protein accessionYP_002015705 
Protein GI194333845 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.130366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.713499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACAA TTGGTTCTTA TCGGCTTCAC TGTCTTGATG TGCAGTACTT CAGTCTTGAT 
GGTGGTTCTG TTTTTGGCGT CGTTCCCAGG GTTATGTGGG AAAAAGTTAT CAGGCCGGAC
TCGTTGAACC GGGTACGGCT TTCAATGAGG CTGCTTCTTA TTTCCGGAAA GGGTCGTCAT
ATTCTCGTTG ATGCCGCAAT GGGCGATGCG TGGCCGGAGA AACTCAGCAA GATCTATTGC
CTGACTGACT TTCGTTTGGA TAACGAGCTC GCCAGGGTTG GTCTGAAGCG TGCCGATATT
ACCGACGTGG TGTTTACCCA TCTGCATTTT GATCATCTCT CAGGCGCTTT TGAACGTCAT
GATGATCATC TTGATACCAT ATTTCCCGAT GCTGTTTTTC ATATTCAGAA GCAGAACTAT
CTGTCTGCGG TTTCTCCGAA TCTGAAAGAG CGCCCCAGTT ACCGCAAGGA GTTTGTTCAG
GCCCTTCAGG AGTGCAGTAA CCTGAATCTG CTTGACGGGG ATACAGAGCT GCTTCCCGGG
ATTGAACTTT TTTGTGTGGG AGGCCATACC GCAGGACAGC AGCTTGTCAG AGTCTTCGAT
GAAAGGCGTT CGCTGGTTCA TGGAGGTGAT CTGCTGCCCT CGGCAGCGCA TCTGGGTTTG
TCGAGAGGGC TTGGATTTGA TATCGAGCCA CTTGAAGTGA TCAATGAAAA ACGACGACTT
CTGTCCCGGA TGCTCGAAGA TCGATCGATT CTTTTTTTTG CTCACGATCC CTTTGTTGAA
GCAGCATCGC TTTGTCTTGA CGAGCGAGGA GAGGCAGTCG TTCATAGCAC CATCTCTCTT
GGGGATTGCT CATGA
 
Protein sequence
MLTIGSYRLH CLDVQYFSLD GGSVFGVVPR VMWEKVIRPD SLNRVRLSMR LLLISGKGRH 
ILVDAAMGDA WPEKLSKIYC LTDFRLDNEL ARVGLKRADI TDVVFTHLHF DHLSGAFERH
DDHLDTIFPD AVFHIQKQNY LSAVSPNLKE RPSYRKEFVQ ALQECSNLNL LDGDTELLPG
IELFCVGGHT AGQQLVRVFD ERRSLVHGGD LLPSAAHLGL SRGLGFDIEP LEVINEKRRL
LSRMLEDRSI LFFAHDPFVE AASLCLDERG EAVVHSTISL GDCS