| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0921 |
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| Symbol | |
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| ID | 6460458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1013549 |
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| End bp | 1017121 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642724924 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002015611 |
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| Protein GI | 194333751 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.85722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.700472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA TCGATTTTGT GCATCTGCAT ACGCATACGC ATTATTCGAT GCAAAGCAGT
CCGATTTTTC CAAAAGAACT TTTTTCCGCC TGTAAAAAAG CAGGGATGGA GTCTGTTGCC
GTAACCGATT ACTCCGCCAT GTTTAATATG CCGGAACTCT TCAGCCTGGC CTCTGATGCA
GGTGTGAAAC TGATTATCGG TAGCGAAGTA TATCTTCTCG AACAGGATGC CCATCATAAT
GGTCGTCATT CAGTCTCGCC ATCACTGATT CTGCTTGTGA AAAACGAGGA GGGGTACAAG
AACCTCTGTA TCCTGCTTTC TCGTGCGGCA AGAGAGGGGT TTGTCAACGC GACACCTCAT
GTCGACAGCT CGCTTCTGAA AGAGTATCAT GCAGGCCTGA TCTGTCTTTC CGGCTATTAT
GCCGGCCGGA TCGGCAGAGC GCTCCTTGCA GGAAATCGCG ATGAAGCCGC ATCGTTTACG
GCCTTCTATC ACGATATTTT CGGTGATGAT TTCTACCTTG AACTGCAGCG TCACTTTGCG
ACCTTCGATG ATCAGCTCAA TAGTGATACC ATAGCGCTTG CAGAGCAGCA TGGAGTCCAG
CTTGTCGCAA CAAACAATGT GCACTATCTC CAGAAAAAAG ATGCAGGCCG TTATCGGGCT
ATGGTCGCAA TTCGGACCAA GGAACGGTTA TCAAGCTCAA ACCTGCAGTG TCTCCCTAAC
AGTGAGCACT ACTTCAAATC GTCAGACGAA ATGGCCTCGC TGTTCAGCAA CGAGCATCAT
GAGCTCTCCA ATACGGCAGC CATAGCCGCA AAGTGCAGCT ATGTGTTCTG TCAGCAGGAG
CCGAGGCTAC CTCACTTTCT TCTTCCTGAA GGGTTTTCCG ATGAAGCAGA ATATCTGCGT
CATCTTACCT ATGAAGGCGC CAGAGAGAAA TATGCCGATC CCGAGTCTCA GGGTCTGACC
TGGCAGCAGG TTGAGGATCG GATCGAAAAA GAGCTTGGGG TCATTATCAG TATGGGGTTC
AGCTCCTACT TTCTCATTGT CAGCGATCTC ATCGCCGCAT CACGTCGTTT AGGGTATTCC
GTCGGTCCTG GCAGGGGATC GGCAGCGGGC AGTATTATAG CCTATCTGAC CGGGATTACC
AGAATAGACC CCCTGAAGTA TAAACTGCTG TTTGAGCGTT TTCTCAATCC GGAGCGTCTC
TCTATGCCGG ATATCGATAT CGATTTCACT CCTGTGGGAA AACAGCGGGT TCTTGATTAT
ACCGTGGACA AATATGGCGA TGACAGTGTC GCAAAAGTTG TCGCTATCGG CACTCTTGGG
GCCCGTGCCG CAATACGTGA CGCAGGACGG GTCCTTGAAG TGCCGCTTCA GGAGGTGGAC
CGGCTGGCAA AGCTTGTGCC TTCAAAACCC GGGACAACGC TTCAGCAGGG CCTTGACGAG
GTCAATGAGT TGCGGGAGCT TGTCGAGAGT TCTTCGCAGA ATAGCACGCT GATGGACTAT
GCGCTTGCCC TCGAAGGGAG GGCTCGCAAT GTGTCGATGC ATGCAGGTGC GGTCGTTATT
ACTGACGGAC CTCTTGAGGA GCAGGTGCCT CTCTACGTCT CGAATAAAAT CGAGACCGAA
GCACGAAAGT TTGCCGATGA GTATAACGAG GATGAGCTTG AACGCGGAGC GCTCAAAAGC
AACAGTGATG AAAAACAGGT TGTGACCCAG TTCGACAAGA ACTGGATTGA GACAGCGGGA
TTGTTGAAAA TCGACTATCT GGGCCTGGAA ACCCTTGCTG TCATTGATGA AACCCTTCAT
CTTATCAAGA AACGCCATGC GGAGGTTATT GAGCTTGAAA CCGTGCCGAT GGACAATAAA
AAAGCGTTCA GGATCTTTCA GGAAGGAAAG ATGGCCGGCA TATTCCAGTT TGAGTCGCAG
GGTATGCAGA ATTATATGAT GCAGCTCCAG CCCACGCAGA TTGGCGACAT CATCGCTATG
AGCGCGCTCT ATCGCCCGGG CGCTTTGAAT GCGAGGGTCG ATCCCAAACG CAACGCGGTT
GATCTTTTTG TCGATAGGAA ACACAACCGC GAACCGATCG ATTACATGCA TCCGATGCTT
GAGGAGATTC TCAAGGAGAC ATACGGCGTT ATTGTCTACC AGGAGCAGGT GATGCAGATA
TCACAGGTTA TGGGCGGTTT TTCTCTTGCA AAAGCCGATA ATCTGCGTAA AGCCATGGGA
AAGAAAAAGC CTGAGATCAT GCAGAAGTTC AAGGCTGACT TCGTTGAAGG GGCTGTCAAC
CAGGGTGTTC ACGACAAGCT TGCCAACAGG ATTTTTGATC TCATGGCGGA GTTCGCCGGC
TACGGCTTCA ATAAGAGCCA TTCTGCAGCA TACGGAGTTC TGGCATATTG GACCGCATAT
CTGAAAGCGC ACTATCCTGG CGAATTCATG ACCGCGATTC TCAACAGCGA GATCGGCGAT
ACGGCAAGAA TGAAGCACCT GACTGATGAA GCCAGAAGTT TCAATATTTC CATTCTTCCT
CCGGATATCA ATACCAGCGA TGCTCTTTTT TCGATCGACG ATGTCGATGG TCTTCCTGCT
ATACGCGTCG GGCTCAGCGC TATCAAACAG GTCGGTAATG CCGCCAGAGC TGTCGTTACC
TCTCGTCTGA GGCGCAAGAA AGAGTACGTC AATCTTTTCG ATCTCACCGC TTCAGTCGAT
CTGAGGGCAA TGAACCGCAA AGCGCTCGAA TGCCTGATCC TGGCCGGAGC CCTTGACAGT
ATCGATCCTA ACCGCGCAAA ACTTATTGCC AATATAGACA AGGCGATCAA GTTCGGCCAG
TTGCAGAACC GCTCTGTGAC GCTGGGGCAG TGCGGTTTTT TCTCCGATGA CAATGCTGGC
GGTATGCAGG ATTCCCTCTA TCCCGATATG GACCCGGCAG ATCCAATGCC CGATTCTGAA
AAACTGCAGG CAGAGAAGAA GCTTGTGGGC TTTTACCTGA GCCGTCATCC GCTCGATCCA
TTTCGTCGCG ATTGGGAGGC TTTTGCCAAT CTTCATCTGG ATGCACGAAA TGTTCAGCCG
TCACGGCAAT ATAAAATTAT CGGCGTTGTC GTTTCGACAA AGCCTCATCA GGACCGAAAA
GGTAATCAGA TGCTTTTCGG GGTTATAGAG GATTTCAGCG GTAAAGCCGA TTTTACCGTT
TTTGCGAGCG TCTATGAGCA GTTCCGGCAC CTGATCAAGG TCGATGAGGC GGTTATGCTT
GTTGCCGAGG CTGAGAGTAG CGGGGGAGCA CTGAAATTGC TTGTCAGAGA AATTGTTCCT
GTTCGGAAGG TCAGGGAAAA CTGCATTGAC AAGGTTGTTT TAAAGATTAA TGCTGACGAT
CCTCTGGACG TTGAAAAGCT GGCGGCTGTG CGTGAGGTGT TCGAAACGCA TAAGGGCGGC
ACTGCGGTGG ATTTCGAAGT AAAGGTTCAG TCGGCCGAAA ATATTGAAAT GCTTCGTGTT
TTTGCACGCG CAACGCCCAT CGATGCCAGT GACGAAACGC TTTCGAAGCT TGAAAAAATT
CTCGGTCCCG ACAATGTTGC TATAGCTGGA TGA
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| Protein sequence | MSNIDFVHLH THTHYSMQSS PIFPKELFSA CKKAGMESVA VTDYSAMFNM PELFSLASDA
GVKLIIGSEV YLLEQDAHHN GRHSVSPSLI LLVKNEEGYK NLCILLSRAA REGFVNATPH
VDSSLLKEYH AGLICLSGYY AGRIGRALLA GNRDEAASFT AFYHDIFGDD FYLELQRHFA
TFDDQLNSDT IALAEQHGVQ LVATNNVHYL QKKDAGRYRA MVAIRTKERL SSSNLQCLPN
SEHYFKSSDE MASLFSNEHH ELSNTAAIAA KCSYVFCQQE PRLPHFLLPE GFSDEAEYLR
HLTYEGAREK YADPESQGLT WQQVEDRIEK ELGVIISMGF SSYFLIVSDL IAASRRLGYS
VGPGRGSAAG SIIAYLTGIT RIDPLKYKLL FERFLNPERL SMPDIDIDFT PVGKQRVLDY
TVDKYGDDSV AKVVAIGTLG ARAAIRDAGR VLEVPLQEVD RLAKLVPSKP GTTLQQGLDE
VNELRELVES SSQNSTLMDY ALALEGRARN VSMHAGAVVI TDGPLEEQVP LYVSNKIETE
ARKFADEYNE DELERGALKS NSDEKQVVTQ FDKNWIETAG LLKIDYLGLE TLAVIDETLH
LIKKRHAEVI ELETVPMDNK KAFRIFQEGK MAGIFQFESQ GMQNYMMQLQ PTQIGDIIAM
SALYRPGALN ARVDPKRNAV DLFVDRKHNR EPIDYMHPML EEILKETYGV IVYQEQVMQI
SQVMGGFSLA KADNLRKAMG KKKPEIMQKF KADFVEGAVN QGVHDKLANR IFDLMAEFAG
YGFNKSHSAA YGVLAYWTAY LKAHYPGEFM TAILNSEIGD TARMKHLTDE ARSFNISILP
PDINTSDALF SIDDVDGLPA IRVGLSAIKQ VGNAARAVVT SRLRRKKEYV NLFDLTASVD
LRAMNRKALE CLILAGALDS IDPNRAKLIA NIDKAIKFGQ LQNRSVTLGQ CGFFSDDNAG
GMQDSLYPDM DPADPMPDSE KLQAEKKLVG FYLSRHPLDP FRRDWEAFAN LHLDARNVQP
SRQYKIIGVV VSTKPHQDRK GNQMLFGVIE DFSGKADFTV FASVYEQFRH LIKVDEAVML
VAEAESSGGA LKLLVREIVP VRKVRENCID KVVLKINADD PLDVEKLAAV REVFETHKGG
TAVDFEVKVQ SAENIEMLRV FARATPIDAS DETLSKLEKI LGPDNVAIAG
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