Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0901 |
Symbol | |
ID | 6458714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 985589 |
End bp | 987178 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642724904 |
Product | peptide chain release factor 3 |
Protein accession | YP_002015591 |
Protein GI | 194333731 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTG AAAAAGAAAT AGCAAAGAGA AGAACCTTTG CAATCATCAG TCATCCTGAT GCCGGTAAAA CAACTCTCAC AGAAAAATTC CTGCTCTTTG GCGGTGCCAT TCAAACCGCC GGAGCTGTCA AACAGAACAA GATTCGCAAA ACAGCGACAA GCGATTTCAT GGAGATCGAA AAACAGAGAG GCATCTCTGT TGCAACCTCG GTAATGGGAT TTGAATACAA CGGTATACGG ATCAATATTC TCGACACACC GGGCCATAAA GACTTTGCCG AAGACACCTA CCGAACCCTT ACCGCCGTCG ATAGCGTCAT TCTGGTTGTC GACTGCGTCA AAGGCGTTGA AGAGCAGACC GAAAAACTGA TGGAGGTCTG CCGAATGCGC AAGACACCCG TCATCATCTT CATCAACAAA ATGGATCGCG AGGGCAAAAA TCCCGTTGAA CTGCTCGATG AACTTGAAGA AAAACTGCAG ATCAATGTCA GACCGCTCAC CTGGCCTATA AGTCAGGGGA TGAACTTCAA AGGGGTCTAC AACATCTACT CAGGTCAGCT GAACCTGTTT GAATCCGATC AGACAAGAAT CACTGAAAAC TTTATAGAAC TTCAGGATAT CAACAGCCCT GAACTCGATC GCTGGATACC GTCTTCATTT ACGAAACAGC TTCGGGAGGA TGTGGAACTT ATCGAAGGTG TCTATGACCC GTTCACCGTA GAAAACTATC GAAACGGTTC CCTTGCCCCG GTTTTCTTTG GCAGTGCCGT CAACAATTTC GGTATCAGGG AACTGCTCCA CACATTCCTC GATATCGCAC CCTCACCCAG TGAACGCGAA GCCATGCAAC GCAGTGTCAA GGCCTCGGAA CCAACCATGA GCGGCTTTGT TTTCAAGATT CATGCAAATC TTGATCCAAA CCATCGCGAC CGTACTGCAT TTTTCAAGAT CTGCTCGGGC ACATTCCAGC GCAACACATT CTATTTCCAC ACCAGGCTGA AAAAGAAACT GCGCTTTGCA AGCCCTACAC AGTTCATGGC CAACGAAAAA AACCTGATCG AAGATGCCTG GCCGGGTGAT GTGATCGGTC TCTATGACAA CGGCAACCTC AAAATCGGCG ACACGCTCAC AGAAGGCGAA GAACTCCAGT TCCGCGGTAT TCCGAGCTTC TCTCCCGAGA TTTTCAAGGA GGTCATCAAC CGTGATCCTT TCAAGTCAAA GCAGCTCGAT AAGGGTGTGC GTCAGCTGAC AGAAGAGGGG GTAGCGCAGC TCTTCATGCA GCACGGCAAC AGAAAAATCA TCGGTACAGT GGGAGAACTG CAGTTCGATG TGATACGATT CCGTCTCGAA CACGAGTATG GCGCAAAATG CGACTTCATG CCGCTGCGTT ACTGCAAAGC GCTCTGGATT ACCAGCCGCG ACAAAGATCA GTACGAAGAG TTTCTCAGAA GAAAATCACC GGTCATCGCT CTCGATAAAG AAGAGCATCC TGTCTTTTTC GCCGAAAGCG AATGGATGCT CAAAGTCGCG ATGGAAAACT ATCCCGGCGT CATTTTCCAC GAAACCTCCG AGTTTAAAAC AAAGCGTTAA
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Protein sequence | MSIEKEIAKR RTFAIISHPD AGKTTLTEKF LLFGGAIQTA GAVKQNKIRK TATSDFMEIE KQRGISVATS VMGFEYNGIR INILDTPGHK DFAEDTYRTL TAVDSVILVV DCVKGVEEQT EKLMEVCRMR KTPVIIFINK MDREGKNPVE LLDELEEKLQ INVRPLTWPI SQGMNFKGVY NIYSGQLNLF ESDQTRITEN FIELQDINSP ELDRWIPSSF TKQLREDVEL IEGVYDPFTV ENYRNGSLAP VFFGSAVNNF GIRELLHTFL DIAPSPSERE AMQRSVKASE PTMSGFVFKI HANLDPNHRD RTAFFKICSG TFQRNTFYFH TRLKKKLRFA SPTQFMANEK NLIEDAWPGD VIGLYDNGNL KIGDTLTEGE ELQFRGIPSF SPEIFKEVIN RDPFKSKQLD KGVRQLTEEG VAQLFMQHGN RKIIGTVGEL QFDVIRFRLE HEYGAKCDFM PLRYCKALWI TSRDKDQYEE FLRRKSPVIA LDKEEHPVFF AESEWMLKVA MENYPGVIFH ETSEFKTKR
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