Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0875 |
Symbol | |
ID | 6460590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 952780 |
End bp | 956025 |
Gene Length | 3246 bp |
Protein Length | 1081 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724878 |
Product | methylmalonyl-CoA mutase, large subunit |
Protein accession | YP_002015567 |
Protein GI | 194333707 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.036821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGG AATTCAGCCC GGTCAGCAAA GAACAGTGGA AAGAGCGGCT TATACAAGAG CTCAAAGGAA GCGATTATGA AACAATCGTC TGGCAAACCC CTGACGGCTT CAGCCAGGAA CCATGGTACA GCCCTGCTGA AACCGGTAAT GCCGGCAACC GTATCCCTTT CTCTACAACA CGGGAGGGAT GGAGTATAGC TGTTGAGATC GATGCCCGAA ATCCTCTTGA AGCAAACAGA GAGGCGATCC GGCAGCTCAT GAACGGAGCT GAAACCATCA TCTTCACTCT TTCCCCGAAG GATATTCCTG ATACGGCATT GCTCGATACA CTTCTTGCCG ATATCGATCT TACAGCCGCA AAGGTTTCTT TCCGCGGCAT TGCCTCACCC GAAAAACTCC TGTCAAGCGC CTCCTCCATT GCAGACTTCA TTCAGAACAG CGGCGGACTG GAGGACAACA CCACGTATAG CCTGCAACTC CTCAAACGAT GCGGTGAACT TCCGCAATTC AGAGCCTTTG GTCTCGATAG CGCCAACAGC AGCATGGGCG AGCTCACCCC CGCCAAGGAG CTGGCAATCA CCCTGACCGG GCTTGAGCGC CTGCTTCATG ATGCGGCCTC AGAACAAACA ACGCCACGCA CTATCGCAGC CAAAACAGGC GTCACCCTGA AAGCCGGTCG ATCTTTTTTC CTCAACATTG CAAAGCTGCG TGCCCTTCGA ATGCTATGGC CCCAGATCCT GGCAGAGCAC GGCGTTGATT CCGACGACCA ATTGGAGCCG CACGTCACCG TCAGGCTCGA TGCCGCAGCA CCCTACCGTG ACGATGAGCA TAACGCGCTT ATCATTCTAG CCACCCAGGC GGTCTCGACG ATCATCGGCG GCTGCGATAC AATGATCATC CCGCCATTGG CCTGCGCATC AGATCACTCA CCCGACATAA CAGGGCATCT CTCAGTCAAT ATCCACCACA TGCTGCGCCA TGAAAGCATG CTCGGTCATG TTCTGGATCC TGCAGGCGGG TCGGCCTATA TTGAAACCCT GACAGCAAAG CTGGCTGAAG AGGCCATGAA AATTTACCGC GAAGCGCTTA CAACGAGAGC TGTCATTCCA TCCAATACCA CCTCCATCGA GTCGTCAGAA CAAAACGAAA ATCAACCATC GACACTACGC TGCGGACAAC AGGAATGGTT GACACCTGAA GGCATTGCGA TCAGAAACTG CTATAGAGCC AACGATAGCG ACAACAGTGA ACAACTCGGG TTCGCCCCGG GATTGCCGCC CTTCAACGCC GGGCCATACT GCTCGATGTA TACCGTCAGG CCCTGGACCA TCCGACAGTA CGCCGGCTTC TCTACCGCTG AAAAATCAAA CGAATTTTAC CGCCAGAACC TCGCCGCAGG ACAAAAAGGG CTCTCGGTAG CCTTTGACCT GCCTACCCAT AGAGGTTATG ATTCCGATCA TCCGAGAGTT GTCGGCGATG TAGGCAAAGC CGGTGTAGCT ATCGACAGCG TCGAGGACAT GAAAATTCTC TTTGACGGCA TACCGCTTGA CACCATGTCT GTTTCAATGA CCATGAACGG AGCCGTTCTG CCGATCATGG CGTTCTACAT CGTTGCAGCA GAAGAACAGG GCGTCCGGCC TGAACAGCTC AGCGGTACTA TTCAGAACGA TATTCTCAAA GAGTTCATGG TGCGCAACAC CTATATCTAT CCTCCCGCAC CATCGATGAG AATCATTGCA GACATCTTCG GCTACACGTC GAAGATGATG CCGAAATTCA ACTCGATCAG CATATCGGGC TACCATATGC AGGAAGCGGG TGCCACAGCT GACCTTGAAC TGGCCTACAC CCTTGCAGAC GGTCTTGAGT ATATCCGTAC CGGCCTTAAC GCAGGACTTG CCATTGATGA CTTCGCTCCG CGCCTCTCGT TCTTCTGGGG TATCGGCATG AACTTCTTCA TGGAAATCGC CAAACTCCGT GCAGCCAGAA TGCTTTGGGC AAAAATCGTC AAGAGGTTCA ATCCGAAAAA CCCTAAATCA CTCATGCTGC GTTCGCACTG CCAGACATCC GGATGGAGTC TGACGGAGCA GGACCCCTTC AACAATATCA CCCGAACCTG CATTGAAGCA CTTGCCGCAG TCCAGGGCCA TACCCAGTCG CTGCACACCA ACGCCCTCGA CGAAGCCATT GCCCTGCCCT CCGTCTTTTC CGCCCGAATC GCACGCAACA CCCAGCTCTA CCTTCAGGAA GAAACCGACA TCACTCGCGC TATCGACCCC TGGGGCGGTT CATACTATGT TGAATCACTC ACTACCGAAC TGGCTCTAAA AGCTTGGACA ATCATTGAAG AGATCGAAAC GATGGGCGGT ATGGTGAAAG CTATCGAACA GGGCTGGCCA AAAATGCACA TCGAAAAAGC CGCAACCGCC AAGCAAGCAC GTATCGATAC CGGTGAAGAT ATCATTGTCG GCATTAACCG CTACACCCCG CAAAACCAGA CAGAACTCGA CACTCTCGAG ATAGATAATA CGGAGGTTCT TCATCAGCAG CTTGCAAAGC TGGAAAAAGT CAAAAAAGAG CGCGACCAGC AAAAAACCGA TAAAGCCATC GAAGCATTGC GCAACGCCGC AAAAAACGGC ACAGGCAACC TGCTGGAACT CGCCCTGGAT GCAGCACGCT CAAGAGCAAC GCTCGGAGAA ATCTCCAGCG CTCTGGAGGA TGCCTTCGGA CGTTACCGAT CCAGCGTCCA GCTCAACGCA AATGTCTACC TTGCACACAT GCATGACAAC ACAGCATTTA AACAGGCACA GGATCTTGCC GATACATTCG CCAGGCATGA AGGGCGCAGG CCAAGAATTC TCGTCGCCAA AATCGGTCAG GACGGCCACG ACCGGGGCGC GAAGGTTATT GCTGCAGGCT TTGCCGATAT CGGGTTCGAT GTCGATATAA GCCCCCTTTT CCAGACCCCT GAAGAAGTTG TTCGCCAGGC CCTCGACAAC GACGTTCACA TCATCGGAGT ATCGAGCCTG GCCGGAGGCC ATAAAACCCT GATACCCTCA GTCGTCAAAG ACCTTGAAAA AGCAGGACGC CGCGATATTG TGGTTATCGC CGGAGGAGTC ATTCCCCACA AGGATTACGA AGCGCTCTAT AAAGCCGGCA TCGCCAAAGT GTTCGGTCCG GGAACCATCA TCGCCGAAGC AGCCTGCGAC ATTCTCGAAA CGATGATTGC AGGATTAGAA GCATAA
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Protein sequence | MFEEFSPVSK EQWKERLIQE LKGSDYETIV WQTPDGFSQE PWYSPAETGN AGNRIPFSTT REGWSIAVEI DARNPLEANR EAIRQLMNGA ETIIFTLSPK DIPDTALLDT LLADIDLTAA KVSFRGIASP EKLLSSASSI ADFIQNSGGL EDNTTYSLQL LKRCGELPQF RAFGLDSANS SMGELTPAKE LAITLTGLER LLHDAASEQT TPRTIAAKTG VTLKAGRSFF LNIAKLRALR MLWPQILAEH GVDSDDQLEP HVTVRLDAAA PYRDDEHNAL IILATQAVST IIGGCDTMII PPLACASDHS PDITGHLSVN IHHMLRHESM LGHVLDPAGG SAYIETLTAK LAEEAMKIYR EALTTRAVIP SNTTSIESSE QNENQPSTLR CGQQEWLTPE GIAIRNCYRA NDSDNSEQLG FAPGLPPFNA GPYCSMYTVR PWTIRQYAGF STAEKSNEFY RQNLAAGQKG LSVAFDLPTH RGYDSDHPRV VGDVGKAGVA IDSVEDMKIL FDGIPLDTMS VSMTMNGAVL PIMAFYIVAA EEQGVRPEQL SGTIQNDILK EFMVRNTYIY PPAPSMRIIA DIFGYTSKMM PKFNSISISG YHMQEAGATA DLELAYTLAD GLEYIRTGLN AGLAIDDFAP RLSFFWGIGM NFFMEIAKLR AARMLWAKIV KRFNPKNPKS LMLRSHCQTS GWSLTEQDPF NNITRTCIEA LAAVQGHTQS LHTNALDEAI ALPSVFSARI ARNTQLYLQE ETDITRAIDP WGGSYYVESL TTELALKAWT IIEEIETMGG MVKAIEQGWP KMHIEKAATA KQARIDTGED IIVGINRYTP QNQTELDTLE IDNTEVLHQQ LAKLEKVKKE RDQQKTDKAI EALRNAAKNG TGNLLELALD AARSRATLGE ISSALEDAFG RYRSSVQLNA NVYLAHMHDN TAFKQAQDLA DTFARHEGRR PRILVAKIGQ DGHDRGAKVI AAGFADIGFD VDISPLFQTP EEVVRQALDN DVHIIGVSSL AGGHKTLIPS VVKDLEKAGR RDIVVIAGGV IPHKDYEALY KAGIAKVFGP GTIIAEAACD ILETMIAGLE A
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