Gene Paes_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0770 
Symbol 
ID6459232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp819999 
End bp821798 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content50% 
IMG OID642724767 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002015464 
Protein GI194333604 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA GTGTCTCGGT CAGACTGGGC CTTGTTTTTG GTATTGTTAT TTTTTTTACG 
GTCGCAATCA GCTACGTCTA TCTGGGAGGA CAGCTCAGAA CGCTTTTTTA TGACGGTATA
AAAAATGAAA TCTACAAGGA ACTCGAACTG AACCGTCAGC TGCTCGACGT CTTCCCGGAA
AAATGGTCGG ATATCAATAG CTCGGACTCA TGGGCTGACG ATGTGGGCGC GGCACTTGAG
GTTCGCGTCA CTCTTATCGC TCTTGACGGC TCGGTTATCG GTGATTCCTA CATTAGCCCC
GACCGCCTCT CCTTTGTTGA AAATCATCTT GCCCGGCCCG AGGTTCAGGG GGCTTTGCAG
GAAGGTTTTG GTGAAAGCAC CCGTTTCAGC GAAACGGTCG GGGAAGATAT GCTCTATGCT
GCCGTTCTTC TGGGCAAGGA GAGTCCATAC GCCGTGCTGA GATTCGCTAA ACCGCTCCAT
GATATTCGTC TTCTCGAAGC TGAGCTGCGC AAGGGCATCG AGGGAGCACT GTTTTGGTCT
CTTCTGCTCT CATTGATGTT TGGCGCTTTG ACGGCATTTC TGCTCTCTAC TCCTCTTCGT
CGCATTGCAG CTGCAGCAGA GAATTTTGTG CATGGTGATT TCACCTTCCG GTTGGATGGG
AAACGCAACG ATGAGATCGG TCAGCTCTCA AGAGCGTTCA ATTTCATGTC AGATGAGATG
AAACGCATGG GACAGCAGGA GGAGTGGTTC AAGGCGGTAT TTTCGAGTAT ACGGGAGGCG
ATTATCGTGA CAGATCCGCG CGGGAGTATC ATTCTTGCCA ACCCCGCAGC CTGCAAGCTC
TTCAAGCTTC AATGCGGTGA TATGCTCCGT TCCCGTCCAG GCCGGAAGGT GACCAACGCT
CAGCTTCTGG ACTTGTTTGA GCGCGTTCGT CTGTCGAGCA AGCCGATTGT CAAAGAGGAG
ATGCTCGTGA TGACGGAACG GGGAGAGAGG GTGCTTCAGA CGAGCGCCAT GCCGGTGATC
AAAGACAGCT ATTCAGATGG AACGGTTTTT GTCCTCAACG ACATTACTCG TCTGCGTAAT
CTGGAGCGCA TTCGAAGAGA TTTTGTGTCA AGTGTTTCCC ATGAGCTTCG CACGCCACTG
ACGAGTATCA AAGGCTATAC TGAGACGCTG CTTGAAGGCG CTCTTGATGA TCGCGAGGAT
GCTATGAATT TTCTGCGTAT TATTCTGCAG GAGAGTGAGC AGCTGACAGC GCTGATCAAT
GATGTGCTTG ATTTATCGAA AATTGAATCA GGCCGTATTG AGTACAAGTT TACACCGGTC
AGTATAGAAG ATGTCGTCTT GAAAACCGTC GCGCTGTTCC GTCGATCACT GGAGAAAAAG
TCCATTGACC TTCAGATCCA GATTCCCGGC GATCTTCCTC CTGTGTTTGC TGATAAGGAT
TATCTTGAGA TAGTCGTGCG CAATCTTTTG GATAATGCCA TCAAATATGT GGCTGACGAC
AGCGGCAGAA TCCGCATTAT TGCTTTTCCT GCCAACGATA TGGTCCGGCT TGAAGTAGAG
GATAACGGTG CAGGGATTCC TCAGAAGGAT CTTGGGCGAA TTTTCGAGCG TTTTTATCGG
GTCGATAAGG CGCGTTCACG ACAAATCGGC GGAACCGGAC TGGGACTGTC GATCGTTAAA
CATATTGTTT TGTCGCACAA GGGCAATGTT GAGGTCCGTT CCCGCCAGAA TCTCGGTTCG
GTGTTCAGCA TAACCATTCC TGTCGCATCA CCCCAACAGC AAGAGCTCTC ATCTTCTTGA
 
Protein sequence
MKSSVSVRLG LVFGIVIFFT VAISYVYLGG QLRTLFYDGI KNEIYKELEL NRQLLDVFPE 
KWSDINSSDS WADDVGAALE VRVTLIALDG SVIGDSYISP DRLSFVENHL ARPEVQGALQ
EGFGESTRFS ETVGEDMLYA AVLLGKESPY AVLRFAKPLH DIRLLEAELR KGIEGALFWS
LLLSLMFGAL TAFLLSTPLR RIAAAAENFV HGDFTFRLDG KRNDEIGQLS RAFNFMSDEM
KRMGQQEEWF KAVFSSIREA IIVTDPRGSI ILANPAACKL FKLQCGDMLR SRPGRKVTNA
QLLDLFERVR LSSKPIVKEE MLVMTERGER VLQTSAMPVI KDSYSDGTVF VLNDITRLRN
LERIRRDFVS SVSHELRTPL TSIKGYTETL LEGALDDRED AMNFLRIILQ ESEQLTALIN
DVLDLSKIES GRIEYKFTPV SIEDVVLKTV ALFRRSLEKK SIDLQIQIPG DLPPVFADKD
YLEIVVRNLL DNAIKYVADD SGRIRIIAFP ANDMVRLEVE DNGAGIPQKD LGRIFERFYR
VDKARSRQIG GTGLGLSIVK HIVLSHKGNV EVRSRQNLGS VFSITIPVAS PQQQELSSS