Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0739 |
Symbol | |
ID | 6460401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 788975 |
End bp | 790549 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642724736 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_002015433 |
Protein GI | 194333573 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA AAGAAAAGGT TCTTATATTC GATACGACAT TACGCGACGG CGAGCAGTCT CCTGGGGCAT CGCTCAACGT TCAGGAAAAA ATTGAGATTG CCAGGCAACT CGAAAAACTC AATGTTGATG TGATTGAGGC CGGATTTCCG GCCTCCTCGC CGCTTCAGTT AGAGGCAGTC CGACGAGTAG GCGAAGAGTC CTCCAGAATT GTAGCGGCTC TTGCCAGAGC GGTTGAACAC GATATCAGCA CAGCGTGGAA AGCGCTTCAA AGCGCTCGAC ATCCTCGTAT CCATACGTTT ATCAGTACAT CGGATATCCA TATCATGGGC AAGTTTGGCC ATGAGCGCTA TGGAAAAACA CTGGCTGAAA AACAAAAGAC CATACTCCGG ATGGCAGTCG ATGCTGTCCT CTACGCAAAA ACCTTCTGTC ATGATATCGA GTTTTCGGCA GAAGATGCTG GACGCACCGA TCCCGGATAT CTTGCAGAAG TCATTGAAGC CGTTATCGAT GCCGGAGCAA CAACCGTCAA TATTCCCGAT ACAACCGGCT ACACGTGGCC ATCGGAATTC GGAAAAAAAA TAGCGGATCT GAAAGAAAGG GTCACCAATA TTGACCAGGC GGTCATAAGC GTTCACTGCC ACAACGATCT CGGCCTCGCC GTAGCAAATA CTCTCAGCGC CATAGAAAAC GGGGCACGTC AGGCAGAATG TTCTATCAAC GGCATAGGAG AAAGAGCGGG AAACGCATCG CTTGAGGAGA TCGTTATGGC CCTCAAAGTA CGCAGTGACC TGCACGACTA CTCCACCGGC ATTACAACAC GTGAAATATA CAACACCAGC CGGATGGTAT CGTCGTTCAC CGGACTTATT GTACAGCCAA ATAAAGCTAT TGTAGGCGAC AATGCATTTT CCCATGAGTC GGGTATCCAT CAGGACGGCA TGCTGAAAAA CCGTCAGACC TATGAGGTCA TGACGCCTCA GTCGGTAGGA GTTCCCGAAA CCCATATCGT TTTAGGGCGT CATTCCGGCA AACACGGCCT TCAGTCAAGG CTGCTTGTGC TCGGCTACAA GGTTGAGGGC GAAGAGCTTG ACAAGGTCTA TCAAAGATTC CTCAGCGTTG CCGACAAGAA AAAAGAGATT TATGACGATG ATCTGAGAGT GCTCATGGGT GACGAATTCA ACCGCCCTGC TGAGCCTATT GAACTCGATT ATCTGCACAT CAACAGCGGG ACCGCATCCA TACCGACGGC AACAGTACGG ATTAAAACCC GTGGCAGAAC ATTTGAAGAA TCGTCCACGG GAGACGGACC GGTTGACGCC TGCTTCAGAG CGATCGAAAG GGCTCTGAAA CTCGATTCAC TTCTCAATTC CTACTCGGTA CGTTCAACCT CCGCCGGCAG GCAGGCTCTT GGAGAAGCAA CGGTGCGGCT CAGGGACGGA GATAATTTTT ATACAGGGCG AGGCGTTTCC ACCGATATTA TTGAAGCAAG TGCAAAAGCA TATCTGCAGG CACTGAGCTT TCATGAGGAT GCCTTGCAAA ACGACAACAA CAATTCAATC GATAACGGGA TATAA
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Protein sequence | MSQKEKVLIF DTTLRDGEQS PGASLNVQEK IEIARQLEKL NVDVIEAGFP ASSPLQLEAV RRVGEESSRI VAALARAVEH DISTAWKALQ SARHPRIHTF ISTSDIHIMG KFGHERYGKT LAEKQKTILR MAVDAVLYAK TFCHDIEFSA EDAGRTDPGY LAEVIEAVID AGATTVNIPD TTGYTWPSEF GKKIADLKER VTNIDQAVIS VHCHNDLGLA VANTLSAIEN GARQAECSIN GIGERAGNAS LEEIVMALKV RSDLHDYSTG ITTREIYNTS RMVSSFTGLI VQPNKAIVGD NAFSHESGIH QDGMLKNRQT YEVMTPQSVG VPETHIVLGR HSGKHGLQSR LLVLGYKVEG EELDKVYQRF LSVADKKKEI YDDDLRVLMG DEFNRPAEPI ELDYLHINSG TASIPTATVR IKTRGRTFEE SSTGDGPVDA CFRAIERALK LDSLLNSYSV RSTSAGRQAL GEATVRLRDG DNFYTGRGVS TDIIEASAKA YLQALSFHED ALQNDNNNSI DNGI
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