Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0667 |
Symbol | |
ID | 6459377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 703322 |
End bp | 705508 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724659 |
Product | helicase, RecD/TraA family |
Protein accession | YP_002015362 |
Protein GI | 194333502 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0540027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0105669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCG GTACAGGTGG AGGGATGGAT GAGCGGTGTA CGGGGGTTGT GGAACGGGTG GTGTTTCACA GCCAAGAGTC GGGGTTTACG GTGCTTCGTG TGAGGATTGA CGAGTGTAGT GATCCTGTAA CTGTTACTGG CGTGCTTCCT GTTGTTTCCG AAGGGGAATC GGTCGATGGT CGCGGGTCCT GGGTTCACGA CCGGCGCTAT GGGCTTCAGT TCCAGACTGT TGAGCTTGCC GTCGTTCCTC CGGCTACCGA AGAGGGGATC GAGCGTTACC TGGCTTCAGG TATGGTGCGG GGTATCGGAT CGCATTTCGC AAGGACTCTG GTGCGGGCAT TCGGGCCAGA GGTTTTTTCG GTTATCGAAA AGGATCCTGA GCGGATGCTT GAACTGCCCG GTATTGGTAA AAAGCGGATG CAGATGGTGG TCGAAGCCTG GGATGAGCAG AAAGCAGTGC GAGATATCAT GGTGTTTCTT CAGTCTCATG GTGTCGGAAC GGCTCGTGCC GTGAGGATAT ATAAAACCTA TGGCGACCAG GCTATTCAGA TCGTGAGCCG TAATCCATAT CGGCTTGTGC TCGATATTCA GGGCATCGGC TTCAGAACGG CTGATGCAAT CGCATCGACC CTTGGTATCG AGCCGAATTC TCTTGTGAGG GCGCAGGCAG GTATACGTCA TGTGCTGGTG GAGTTGTCAG GAGATGGTCA CTGTGCCATT CGTCGTCCGG AACTGTTATC GGCAGCCCTC AGATTGCTGG GCATAGGTGA AGAGATCATT TCGGAGGCTC TTAAGGAGGA GATTATTCGT GGTGCGATTG TTCAGGAGGA GATAGATGGC TCCGAATGCT GTTTTCCGGC GAATCTTTTT CGTGCAGAAA GCACAGTTGC ATCGCGGATT GCCTCATTGT GTGGCGGGAA ACTGCCGTGG GGTGATGTCG ACGCAGACGA TGCCATTGCA TGGGTGGGAA CGTCTACGGG GCTTGAGTTA TCGCCTTCCC AGGCCAGTGC GGTGCAGACT GCTGTTGCGA GTAAGGTTCT GGTCATTACC GGCGGCCCCG GTGTCGGAAA AACCACGCTT GTCAATTCGA TTCTGAGCAT TCTTAAACGC GAAGACATCA AAGTTGCTTT ATGCGCCCCA ACGGGCAGAG CCGCTAAGCG GCTGAGTGAG TCTACGGGTA TGGACGCCAG CACCATTCAC AGGCTTCTTG AGTTTGATCC TTGTTCTTTT GATTTCAAGC ATAACCGGAC CAATCCGGTC AGGGCTGATC TGGTGGTCGT TGACGAGGCG TCGATGATCG ATATTGTCCT CATGCAGAAG CTTCTGCTCG CTGTGCCGGA TGATGCGGCA CTGATTATTG TAGGGGATGT CGATCAGCTA CCGTCAGTCG GACCCGGCTC TGTTCTTTCC GATATCATTA CCTCCGGTGC GGTTCCCGTT GTTCGCCTGA CGGAGATCTT CCGGCAGGCT GAGGCTTCCC GCATCATTGT CAACGCGCAT CGTATTAATC GGGGAGAACT GCCGGTCAAT CCTGAGAGTA CAGAGACATC GGATTTCTAT CTGGTGCCTG CGTCAGGTCC CGCAGATATC TTTTCGAAAG TGATGCAGCT TGTGCTCGAG AGAATTCCTG CAAAGTTTGC AATGGACCCG GTCAGGGATA TACAGGTGCT TACCCCTATG AACAAGGGCG GGCTGGGAAC TCTTGCTCTC AACAGCGCTC TTCAGAAGGC GCTGAACCCT TCAAGCAAAG ACGGCATCAG CCGCTTCGGG ACCATGTTCG CTCAGGGCGA TAAGGTTATC CAGCAGGTTA ATAATTATGA TAAAGAGGTT TTTAACGGAG ATATAGGAAT GATCTCCTCA CTCGATGCCG ATGGGAAAAA ACTGACGGTG TTGTTTGGCA GCAACACTAT TGATTATGAG TTCGGCGAGC TTGATGAATT GAGCCTGGCT TATGCGACAA CGATTCATAA AAGTCAGGGG TCCGAGTATC CCGCCGTTAT CATTCCTCTT TCCATGCAGC ATCTGATGCT GCTTCAGCGC AACCTGCTCT ATACCGCTGT AACCAGGGGG CGGCGGCTTG TTATGGTTAT TGCCGAGTCC AATGCGGTAT TGAAAGCTGT GCGGAACGGT TCTGCCGGGG GACGGTTGAC AAACCTTGCA GAAAGGCTTC GTGCAGAGTT CCGATAG
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Protein sequence | MSSGTGGGMD ERCTGVVERV VFHSQESGFT VLRVRIDECS DPVTVTGVLP VVSEGESVDG RGSWVHDRRY GLQFQTVELA VVPPATEEGI ERYLASGMVR GIGSHFARTL VRAFGPEVFS VIEKDPERML ELPGIGKKRM QMVVEAWDEQ KAVRDIMVFL QSHGVGTARA VRIYKTYGDQ AIQIVSRNPY RLVLDIQGIG FRTADAIAST LGIEPNSLVR AQAGIRHVLV ELSGDGHCAI RRPELLSAAL RLLGIGEEII SEALKEEIIR GAIVQEEIDG SECCFPANLF RAESTVASRI ASLCGGKLPW GDVDADDAIA WVGTSTGLEL SPSQASAVQT AVASKVLVIT GGPGVGKTTL VNSILSILKR EDIKVALCAP TGRAAKRLSE STGMDASTIH RLLEFDPCSF DFKHNRTNPV RADLVVVDEA SMIDIVLMQK LLLAVPDDAA LIIVGDVDQL PSVGPGSVLS DIITSGAVPV VRLTEIFRQA EASRIIVNAH RINRGELPVN PESTETSDFY LVPASGPADI FSKVMQLVLE RIPAKFAMDP VRDIQVLTPM NKGGLGTLAL NSALQKALNP SSKDGISRFG TMFAQGDKVI QQVNNYDKEV FNGDIGMISS LDADGKKLTV LFGSNTIDYE FGELDELSLA YATTIHKSQG SEYPAVIIPL SMQHLMLLQR NLLYTAVTRG RRLVMVIAES NAVLKAVRNG SAGGRLTNLA ERLRAEFR
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