| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0590 |
|---|
| Symbol | |
|---|
| ID | 6460249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 630177 |
|---|
| End bp | 630743 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642724589 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002015293 |
|---|
| Protein GI | 194333433 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.583994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.972517 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTGG TTGATTCTCC TAATGATCGC AGATCTTCAC GTAAAGGCAA CCGTCAGAGT
AAACGTCTCG GTTTTCATAT TGATATGACG CCGATGGTGG ATGTGGCGTT CCTGCTGCTG
ACGTTCTTCA TGCTGACAAC GACCTTCGGC AAGCCCAATA CCATGGAGAT CAATATTCCG
CCAGAGAGCG GAGAGGTCAA GATTGCCGAA AACAACGTTA TGACATTCCG TATCGTTGAA
GACGGTTATG CATACTGGTC GATCGGTGAT CAGACTCCGA CCCGGATCAG CCTGTACGAC
GAAGGCCGTG AACGCGGAGC AATGTCGCTC GGAAAGGAGC TTCGTCTCAT GCTCCGTCAG
CAGACCGCCT TGAACGCTAA GTTGGTAATT ATTGTCAAAA TCAGCGACAG GGCCAAGTAC
AAGTACCTTG TCGATCTTAT TGATGAGTTC AATCTTCTTC AGATCGACCG TTTCAGTCTC
GATGATTTTA CCGATGATGA CGCCAGTGCC GTGGGTATGG TTGCTTCAAC CGGCAGTAAC
GTCGGGCGTG ATGCGGCAAT GAACTGA
|
|---|
| Protein sequence | MGLVDSPNDR RSSRKGNRQS KRLGFHIDMT PMVDVAFLLL TFFMLTTTFG KPNTMEINIP
PESGEVKIAE NNVMTFRIVE DGYAYWSIGD QTPTRISLYD EGRERGAMSL GKELRLMLRQ
QTALNAKLVI IVKISDRAKY KYLVDLIDEF NLLQIDRFSL DDFTDDDASA VGMVASTGSN
VGRDAAMN
|
|---|
| |