| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0553 |
|---|
| Symbol | |
|---|
| ID | 6460019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 596438 |
|---|
| End bp | 597367 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642724552 |
|---|
| Product | dihydroorotate dehydrogenase family protein |
|---|
| Protein accession | YP_002015256 |
|---|
| Protein GI | 194333396 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0300599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.358914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGG AATCACGACA CACCGCAGTC GCTCTGGGAA GAGGGCTCGA ACTGCGTTCA
CCGGTCCTTC TCGCCTCGGG AACAGTCTCC TACGGCGAAG AACTCTCGAA ACTCACCGAC
CTCAGCCGCA TCGGAGGCCT TGTCACCAAA GCAATCTCTC CCGAACCGCG TATCGGCAAC
AGGCCCCAGC GAATCGCTGA AACCCCCTGC GGCATGGTCA ACGCCATCGG ACTGGCCAAT
GTTGGCCTCG AACGCTTTGT AGCAGAAAAA CTCCCTTTCC TGCAAAACCT CGATACAGCA
GTCATCGTCA ACGTGGCCGG AAAATCCATC GACGATTACG TTCAGGTTGT GCAGCGTATT
GATGAATACG ACGGCATCGA TGGCTACGAA ATCAACCTCT CCTGCCCGAA CGTCAAGGGA
GAATGCATGA TCATGGGCGT CAGCAGCACA GCAACCTTCG AAATCATCTC GAAGCTGCGT
TCGATCACCA ATCGCCACCT CATGGTCAAA CTCACCCCGA ACGTCACCTC TATCAGCGCC
ATCGCGCTGG CCGCCGAAGA AGCAGGCGCA GACTCCGTCT CCCTGATCAA CACACTGGTC
GGAATGGCTG TGGACCACAA AACAAGAAAA CCACTCCTCA CCAACATCAC GGGAGGCCTG
TCCGGCCCCG CCATCAAGCC CGTTGCTCTT GCCAAAGTCT GGGAAGTCTA TAACGCCGTC
AACATCCCTA TCGTCGGCAT GGGAGGCATT TCCAACGTCG AAGACGCCAT GGAATTCCTC
GTCACCGGCG CCAGAGCGAT CCAGATCGGC ACCATGAACT TCGTCTACCC CGACATTGGC
CAAACCATCG CCGACAAGCT CGAAGAGTAC TTCTCAAGCC CGGAACAGAT GACACTGGAA
GAGTATAGCG GAAGCTTGAT TGTGGCGTAA
|
|---|
| Protein sequence | MTQESRHTAV ALGRGLELRS PVLLASGTVS YGEELSKLTD LSRIGGLVTK AISPEPRIGN
RPQRIAETPC GMVNAIGLAN VGLERFVAEK LPFLQNLDTA VIVNVAGKSI DDYVQVVQRI
DEYDGIDGYE INLSCPNVKG ECMIMGVSST ATFEIISKLR SITNRHLMVK LTPNVTSISA
IALAAEEAGA DSVSLINTLV GMAVDHKTRK PLLTNITGGL SGPAIKPVAL AKVWEVYNAV
NIPIVGMGGI SNVEDAMEFL VTGARAIQIG TMNFVYPDIG QTIADKLEEY FSSPEQMTLE
EYSGSLIVA
|
|---|
| |