Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0517 |
Symbol | |
ID | 6460375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 560722 |
End bp | 561729 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642724516 |
Product | integrase family protein |
Protein accession | YP_002015220 |
Protein GI | 194333360 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCATG TGGAGGAGTT TAAGCCAGCA GAAAACAACG AATCACAGTA CCCCTTTCTG AAGGGATTTC TGGACTATGT GACGCTCGAA CGTCACTTTT CGCGTCACAC CCGAGAGGCC TATCGTACCG ATATTTGTCA GTTTTACACG TTTATCCGTT ATCAGCATAC TCTTGCCGAC AAGGATCCGA TCGATCCTGC GTCGATCAGT GTGCTCGACG TACGACTGTT TATGGGTGAG CTGCTTGAAA AGGGTCTTCA GCCAAAATCA ATTGCACGCA AGCTTGCTGC AGTTAAAAGC TTCTACAATT ATCTTCTTGA AACCGGTGCT GTCAAAGTTT CGGTTCCCTC ACAGGTGATC ACTCCCCGTT TCAGTAAACC GGTTCCCGGA TTTCTCAGCG AGCGTGAGAC AGAGAAACTC TTTGACGAAC TGCTTTCGCT GCCTGCTCCA GGTGAGGCTT TGGGAGCCGT TAGGGCAGGG GATGGCGGCT TTACCTATGC GCGTGACAGG GCTCTTCTGG AAGTGCTCTA TGGTTGCGGT CTGCGCATTT CGGAAGTCAT AGGTCTTCAA TATGAGAACG TCAATCTGCA GGACAGCCTG CTTCGTGTTT CCGGTAAAGG GGGAAAACAG CGTATTGTAC CGCTTGGCGG CCCTGCGCGC ACGGCATTGA GAAATTATTT TGAAGTCAGA CGAAACTTCT TTAGAATGAA AAATGAAGAG TCGCCTGATG CGTCCTATGT GTTTGTAACG AAAAAAGGTA GGCGTATTTA TCCGGTTCTT GTTCAGAGAG TTACCAGAAA ATATCTTTCA GCAGTGACAG AAATCAAGTA CAAGAACCCT CATGTCCTTC GCCACAGTTT TGCCACACAT ATGCTCAACA GCGGAGCTGA CCTGAAAAGT GTCAGTGAAA TGCTGGGGCA TACCAACCTT ACGACGACCG AAATTTATAC CCACGTAACG TTTGGCAGAA TTAAAGAAGT TTACCTGAAA GCTCATCCGA AAGCCTGA
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Protein sequence | MQHVEEFKPA ENNESQYPFL KGFLDYVTLE RHFSRHTREA YRTDICQFYT FIRYQHTLAD KDPIDPASIS VLDVRLFMGE LLEKGLQPKS IARKLAAVKS FYNYLLETGA VKVSVPSQVI TPRFSKPVPG FLSERETEKL FDELLSLPAP GEALGAVRAG DGGFTYARDR ALLEVLYGCG LRISEVIGLQ YENVNLQDSL LRVSGKGGKQ RIVPLGGPAR TALRNYFEVR RNFFRMKNEE SPDASYVFVT KKGRRIYPVL VQRVTRKYLS AVTEIKYKNP HVLRHSFATH MLNSGADLKS VSEMLGHTNL TTTEIYTHVT FGRIKEVYLK AHPKA
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