| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0453 |
|---|
| Symbol | |
|---|
| ID | 6460306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 485541 |
|---|
| End bp | 486212 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642724452 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_002015156 |
|---|
| Protein GI | 194333296 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0170] Dolichol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.843154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGT CAGGCACACC GGAAAATGAA CACAAGCCCT TCAGGTTTGA AATTGCCCGT
AAGATCATAC ACCTCTCCTC GCTCTCCATC GCGATCATAT ACTGTCATAC CAGCAGAGAA
GTTGCCCTTA TGCTCCTCAT TCCGCTCTTT GCCGGTTTTT TCATTGTCGA TATTCTGAAA
AATATCGTTC CGCCCATAGC ATCCTGGTAC CACAACACCT TTGATGCCAT GCTTCGCCAA
CACGAACTCG AAACGCAGCA CATCCACTTC AACGGAGCGA CATTTATCAC GCTTTCAGCG
TTACTGCTGG TTCTTCTTTT TCCCAAGATT CTTGCTATAA CAGCATTTTC ACTGGTGGCG
GTGTCCGACA CGCTTGCCGC GCTTGTCGGG AAAAAATTCG GAACCCATCG CATTGGCGAA
AAAAGCATAG AGGGAAGCGC AGCATTTCTC ATTTCCGCAC TTGTCATCAT AGCCATCATA
CCCGGGCTCG ACCCTGTCGC TGGCATTGTG ATGGCTGTAA CGGCCACCCT CATCGAAGCG
CTTTCGCTGC GAATCGGCAA ATTTAAAATC GATGACAATC TCACCATTCC GTTAACGAGC
GCGCTGGCAG GCTATCTCTT TTATCTCATC CTGCAACCGG GCGACATCCC CGCACTCTCA
TTCTGCCCAT AG
|
|---|
| Protein sequence | MTLSGTPENE HKPFRFEIAR KIIHLSSLSI AIIYCHTSRE VALMLLIPLF AGFFIVDILK
NIVPPIASWY HNTFDAMLRQ HELETQHIHF NGATFITLSA LLLVLLFPKI LAITAFSLVA
VSDTLAALVG KKFGTHRIGE KSIEGSAAFL ISALVIIAII PGLDPVAGIV MAVTATLIEA
LSLRIGKFKI DDNLTIPLTS ALAGYLFYLI LQPGDIPALS FCP
|
|---|
| |