| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0391 |
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| Symbol | rho |
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| ID | 6459236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 424595 |
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| End bp | 425884 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642724389 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_002015095 |
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| Protein GI | 194333235 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000575661 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0124015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAACA ATTCAGTTAC CAAAGGTCTG GACATCAATA TGCTCCAGAA AAAGAAAGTT
CATGAGTTGA ATGCTTTAGC CAAGGAGATC GGGGTTTCAA GTGCCGGACT GCGCAAAGAG
GAGCTGATTT ACAAAATCAT TGAAGCCCAG TCACAGAAAG GGGGGAGTGC TGAAAATGGA
CAGGTGATGG TCAATACCGG GGTGCTTCAG GTTATTCCTG AAGGCTACGG ATTTCTCCGG
TCGGCAAACT ACAATTACCT CTCATCGCCA GATGATATCT ATGTTTCTCC TTCACAGATC
AAACGCTTTA ACATGCGTAC CGGCGATACT GTATCGGGTC AGGTGCGAGC TCCGAAAGAA
GGGGAGCGGT TTTTTGCGCT GCTTAAAATC GATACTATTG ACGGAAAAGA TCCTGAAATA
ACCAGAATCA GGCCCTTTTT CGATAATCTT ACCCCCCTTT TTCCCACCGA ACGCCTTATG
CTCGAAACCA AGCAGAACGA GCATTGCGGA AGGATTATGG ATATTTACAC TCCGATCGGT
AAAGGCCAGA GGGGCTTGAT TGTCGCTCAG CCGAAGACGG GTAAAACGAT GCTTCTTCAA
ACTGTGGCCA ATGCAATTAT CAAGAATCAT CCGGAGGTGT ATCTGATCGT ACTTCTGATC
GATGAGCGAC CTGAGGAGGT GACCGATATG CAGCGGAGCG TTCCTGCTGA AGTCGTCAGT
TCGACATTTG ATGAAGATCC CGAGCGTCAC GTCCAGGTTG CCGATATGGT TCTGGAGAAA
GCAAAGCGTC TTGTTGAGGT CGGTCACGAT GTGGTGATTC TTCTGGATTC CATTACCCGC
CTTGCTCGTG CCCACAACAC CATTATACCC CATTCAGGGA AGATTCTTTC CGGTGGTATC
GATGCTAACG CACTGACCAA ACCTAAGCGC TTTTTCGGAG CTGCCCGCAA TATCGAGGAG
GGGGGCAGTC TGACTATTAT TGCAACTGCG CTCGTTGATA CCGGTTCGAG AATGGATGAC
GTCATTTTTG AAGAGTTCAA GGGAACAGGA AACATGGAGC TTGTTCTCGA CCGGCGTCTG
TCGGAGCGGC GAATTTTTCC CGCTATCGAT ATTCTCCGTT CGGGTACGCG GAAAGAGGAG
CTTCTGTTCA CCCAGCAGGA ACTCTCCCGA ACATGGCTGC TGCGAAAGTA TCTCGCTGAC
AAAAACCCTA TTGAATGTAT GGAGTTCATG CGTGAAAAGA TGTCTGATAC CAAGGACAAT
AAAGAGTTCT TCAAGTACAT GAACGGTTGA
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| Protein sequence | MSNNSVTKGL DINMLQKKKV HELNALAKEI GVSSAGLRKE ELIYKIIEAQ SQKGGSAENG
QVMVNTGVLQ VIPEGYGFLR SANYNYLSSP DDIYVSPSQI KRFNMRTGDT VSGQVRAPKE
GERFFALLKI DTIDGKDPEI TRIRPFFDNL TPLFPTERLM LETKQNEHCG RIMDIYTPIG
KGQRGLIVAQ PKTGKTMLLQ TVANAIIKNH PEVYLIVLLI DERPEEVTDM QRSVPAEVVS
STFDEDPERH VQVADMVLEK AKRLVEVGHD VVILLDSITR LARAHNTIIP HSGKILSGGI
DANALTKPKR FFGAARNIEE GGSLTIIATA LVDTGSRMDD VIFEEFKGTG NMELVLDRRL
SERRIFPAID ILRSGTRKEE LLFTQQELSR TWLLRKYLAD KNPIECMEFM REKMSDTKDN
KEFFKYMNG
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