Gene Paes_0389 details

Gene Information

• Locus tag: Paes_0389
• Symbol: ruvA
• ID: 6459242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prosthecochloris aestuarii DSM 271
• Kingdom: Bacteria
• Replicon accession: NC_011059
• Strand: +
• Start bp: 422389
• End bp: 422991
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642724387
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_002015093
• Protein GI: 194333233
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000174867
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.0250824
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTACGCAT ATTTCCGCGG TGAGTTGATC TCATCTTCCC GTGATAATGC CATTGTCGAT 
GTTGGCGGTG TTGCATACCG TCTTCTTATA TCCAACAGCA CCTATCGTCA GTTGCCGAGC 
TCCGGTGACC AGGTGAAACT GCTTGCTCAT CTTCATGTTA AAGAAGATCT GATGCAGCTT 
TACGGGTTTA TCGAGGAGGA AGAGCGTCAG CTGTTTCTGC TGCTGTTGTC GATATCAGGG 
GTTGGGCCGA AGCTCGCTCT TGCGATTCTT TCCGGTCTCC CTGTCGAGGA GATACAGGAG 
GCGATTATGG CCAATAAACC GGAGACGCTT TTCGGCATCA GCGGCGTGGG TAAAAAAACA 
GCAGCCAGGA TCATTCTTGA ACTGCGCGAC AGGATTTTGA AACTACAGCA GACGCGTCCG 
GGGAAAACGG CTGGCGCTGG TTCTGTGGCG AGTCTGTCTG AAGATGCCCT TCAGGCTCTC 
ATGACGCTCG GTTTTTCCAG GGCTTCCGCG CAACAGGCGG TTACCAGGGC TCTTCTGTCC 
GCTGAAAATC CCGGAGTCGA AGATATCGTC AGAGAGGCGT TGCAAAATAT TCGTAATCAT 
TAG 

 

Protein sequence

MYAYFRGELI SSSRDNAIVD VGGVAYRLLI SNSTYRQLPS SGDQVKLLAH LHVKEDLMQL 
YGFIEEEERQ LFLLLLSISG VGPKLALAIL SGLPVEEIQE AIMANKPETL FGISGVGKKT 
AARIILELRD RILKLQQTRP GKTAGAGSVA SLSEDALQAL MTLGFSRASA QQAVTRALLS 
AENPGVEDIV REALQNIRNH