Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0251 |
Symbol | hemE |
ID | 6460619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 261092 |
End bp | 262147 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642724242 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_002014955 |
Protein GI | 194333095 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.821676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.456057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAA ATGATCTTTT TCTTCGGGCG TTGAAGCGGC AGCCGGTTCC AAGGACTCCG ATCTGGGTGA TGCGGCAGGC AGGCCGATAT CTGCCTGAGT ACCGCGCAAT CAGAGAAAAA ACTGATTTTC TGACCCTGTG TAAAACCCCT GAACTGGCTG CAGAAGTCAC TATTCAGCCT GTGGATATCA TTGGGGTTGA TGCGGCTATC ATTTTCTCGG ATATCCTTGT TGTCAACGAA GCTATGGGCA TGGATGTTCA GATCATAGAG ACCAAAGGTA TCAAACTGAC CCCTCCGATC CGTTCTCAGG TTGATATTGA TCGCCTCATT ATTCCTGATA TCGAAGAGAA ACTTGGCTAT GTTATGGATG CTATCCGTCT GACCAAGAAA GAGCTCGATA ACAGGGTTCC TCTTATCGGC TTTTCCGGTG CTGCATGGAC GCTCTTTACC TATGCTGTTG AGGGTGGGGG ATCGAAGAAT TACGCTTTTG CCAAGAAAAT GATGTATCGT GAGCCACAGA TGGCCCACAT GCTTTTGAGC AAGATCTCTC AGGTTATTAC CGAGTACCTG CTTATGCAGG TTGAGGCAGG AGCTGACGCG CTTCAGATTT TTGATTCATG GGCAAGTGCT CTTTCTGAAG ATGACTATCG TGAGTTCGCC CTTCCTTATA TCAAGGAAAG CGTTCAGGCT ATCAAAACCA AATATCCCGA TATTCCGGTT ATTGTGTTCT CTAAAGATTG CAATACCATT CTTTCCGATA TTGCTGATAC AGGCTGTGAT GCTATGGGCC TCGGCTGGAA CATGGATATT GCAAAAGCCC GCAAAGAACT TCAGGACCGT GTCTGTATTC AGGGTAATAT GGATCCGACA GTTCTCTACG GTACCCATGA TAAAATCAAA GCGGAAGCCG CTAAAATTCT CAAGCAGTTT GGTCAGCATA CCGCAGAGTC CGGTCATGTC TTCAATCTTG GTCACGGTAT TCTTCCTGAT GTTGACCCGG CAAATCTCAA ATGCCTGGTT GATTTTGTCA AGGAAGAGAG CCCGAAATAC CACTGA
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Protein sequence | MLKNDLFLRA LKRQPVPRTP IWVMRQAGRY LPEYRAIREK TDFLTLCKTP ELAAEVTIQP VDIIGVDAAI IFSDILVVNE AMGMDVQIIE TKGIKLTPPI RSQVDIDRLI IPDIEEKLGY VMDAIRLTKK ELDNRVPLIG FSGAAWTLFT YAVEGGGSKN YAFAKKMMYR EPQMAHMLLS KISQVITEYL LMQVEAGADA LQIFDSWASA LSEDDYREFA LPYIKESVQA IKTKYPDIPV IVFSKDCNTI LSDIADTGCD AMGLGWNMDI AKARKELQDR VCIQGNMDPT VLYGTHDKIK AEAAKILKQF GQHTAESGHV FNLGHGILPD VDPANLKCLV DFVKEESPKY H
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