Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0242 |
Symbol | |
ID | 6458956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 250510 |
End bp | 251844 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642724233 |
Product | outer membrane efflux protein |
Protein accession | YP_002014946 |
Protein GI | 194333086 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.231209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTATGA AGGGCTTAAA AAGATATCGG GGAATCGCTG CTGCGGCGTG TCTGCTGCTG CTCCCGTCCG TCGCCAATGC GCAGGCCATG AAGCTTTCGG CTAACCAGGC CGTCGATATC GCGTTAGAGA ACAACTATTC GCTCAAGGTT GCTGAAAGTC GTGTCGATCA GGCCGATGCG CGCTATCTTC AAACCCGCAA GGCGTACCTG CCTACGGTAA CGCTGTCGGA AACGTTTGTC GGTACTAATG ATCCGGCTGC AGTGTTCAGC TATAAGCTTC GTCAGCGGAT TGTCAGCCCT GCCGATCTTG GCAATCAGTA TCTGATTAAT AATCCTGAGG CTATCTCGAA TTTTCAGGTG GGCATCGAGG TGATGCAGCC CCTTGTCAAT ATTGATGCCA GAAAGGGCCG TTCGGCTGCA GCAGCTGCCA GAAAATCTGC AGAATATCAG CTCGATCGTG CCGGGGATAC CGTCGGGTTC GAGGTCAGGA AGGCCTATTA CGGGCTTGTT CTTGCAACAA GCAATCTGAA GGCGGTCGAC CGCTCGATTG CGGCCATGCA ATCACACGAC CGTGAAGCCG GAAGAGCCTA TGCAAAGGGG CTGATCACCA AGTCGGACAA GCTGTCGACC GGTGTACGTC TGGCGGAACT CAGAGAGCAG CGGATGATGA TTCAGGATGA GATCAGAACC GCTTCTGATG CACTTTGTTT TCTGTTGCGT CTTGACGGAG ATACCGTTAT TGAGCCTGTT GACGATCTAT TGAGCGGCGG GCCCGGAGTT GTTGCCGGGG CCGAAGGAGT TGCTGAAGGG CGTGCAGACC TGAAGGCCCT TGAAGCGGCA ACTGAAGCGG CAGGGTACCA GTATCAAATG GCAAAAGCAT CGTCGCTGCC CCGGTTGAAC GCATTTGGCC AGACAAACTG GAATGATAAC AGTTTTCCGG GACTTGACGA ACATAACTGG ACTGTCGGGA TGACGCTGAG CTGGACGGTA TTCGACGGGT ATGGAGCTAT TGGTAAGGCT CAGGAGGCAA AAGCTGCAGA ATTGGAGTCG CGTTACCGCT ATGAGGAGGG GCGCGACAGA AGTCGTTACG AGGTACGACA GGCTTCGAGG TCACTGTCTA CGGCTCGATC ACGAATCGCT ATTGCGCGAC AGGCCCTGGA AGAGGCGAAA GTGAGCCTTG ATTATATTGG CGAACGCTAT CGCAGCGGTA TGGCTATGAC GTTTGAGCTG CTCGGAAGAG AGTCTGCATA CACCTATGCT CAGATGAGAC TTAATAAAGC GAGATATGAT TATATCATTG CGGGCCATGA GCTTCAGTAT GCCTCCGGTC TCTGA
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Protein sequence | MVMKGLKRYR GIAAAACLLL LPSVANAQAM KLSANQAVDI ALENNYSLKV AESRVDQADA RYLQTRKAYL PTVTLSETFV GTNDPAAVFS YKLRQRIVSP ADLGNQYLIN NPEAISNFQV GIEVMQPLVN IDARKGRSAA AAARKSAEYQ LDRAGDTVGF EVRKAYYGLV LATSNLKAVD RSIAAMQSHD REAGRAYAKG LITKSDKLST GVRLAELREQ RMMIQDEIRT ASDALCFLLR LDGDTVIEPV DDLLSGGPGV VAGAEGVAEG RADLKALEAA TEAAGYQYQM AKASSLPRLN AFGQTNWNDN SFPGLDEHNW TVGMTLSWTV FDGYGAIGKA QEAKAAELES RYRYEEGRDR SRYEVRQASR SLSTARSRIA IARQALEEAK VSLDYIGERY RSGMAMTFEL LGRESAYTYA QMRLNKARYD YIIAGHELQY ASGL
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