Gene Paes_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0193 
Symbol 
ID6460269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp198758 
End bp200053 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content55% 
IMG OID642724186 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_002014899 
Protein GI194333039 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAT TAACCAGATC AGCAGAACTC TTTGAAAAAG CAAAGCAGTT TATTCCAGGC 
GGCGTAAACT CCCCGGTACG TGCCTTCAAA TCGGTTGGCG GCACCCCTAT CTACATGGCA
AAGGGCCAGG GCGCCTACAT GACCGACGTT GACGGCAATA CCTATCTGGA TTACGTTGGC
TCATGGGGAC CTTTCATTCT CGGCAGCATG CACCCAAGAA TCACTGCCGC ACTCGAGCAC
ACCCTGACCA AAATCGGCAC CAGTTTCGGC ACCCCGATTG AAATGGAAAT CGAGATTGCA
GAACTGCTCT GCCAGATCGT TCCGTCGATC GAAATGGTCC GCATGGTCAA CAGCGGAACC
GAAGCGACCA TGTCTGCTGT GCGCCTTGCG CGAGGCTATA CCAGCCGTGA CAAAATCATC
AAATTTGAAG GCTGCTACCA TGGTCATGGA GACAGCTTCC TGATCAAAGC CGGCTCAGGC
GCTCTGACGC TTGGCGCTCC CGACAGCCCC GGCGTCACCA AAGGCACCGC AAACGATACG
CTGAACGCGA AATACAACGA TATCGAATCT GTCAGACTGC TCGTCAATGA GAACAAAGGC
AATATTGCTG CCATTATTAT TGAACCGGTT GCAGGCAACA CCGGCGTGAT TCCTGCCAAG
CCAGGCTTCC TGCAGGCGCT GCGCGATCTG TGTACCGAAG AGGGTATCGT GCTTATTTTC
GACGAGGTCA TGTGCGGCTT CCGCGTAGCG CTCGGCGGCG CTCAGGAACG TTACGGCGTC
ACCCCGGATC TTACCACCAT GGGTAAAATC ATCGGCGGCG GTCTTCCTGT CGGCGCTTTC
GGCGGAAAAC GTGAAATCAT GGAACGCATT GCTCCGCTCG GCGATGTCTA TCAGGCAGGA
ACACTTTCCG GCAACCCGCT CGCACTGACA GCTGGTCTGG AAACGCTCAA GATTCTGCGC
GACGAAAACC CTTACCCGGA ACTCGAAAGA AAAGCAGCGT TCCTCGAAGA GGGCTTCCGC
AACAACATGA ACAAGCTCGG CCTGAACTAC GTACAGAACC GCGTCGGATC CATGGCATGT
CTCTTCTTCA CCGAAACTCC GGTTACCGAC TACGATACCG CGGTCACTGC GGACCTGAAA
AAGTACGGCA CCTACTACCA TGCCATGCTC GATCAGGGCA TCTACCTCGC ACCATCGCAG
TTTGAAGCGA TGTTCACCAG CGCAGTCATG ACCGACGAGG ATCTTGAGAA AACCGTCAAG
GCCAACTACG TCGCACTCCA GGCTACCCAG AAGTAA
 
Protein sequence
MPQLTRSAEL FEKAKQFIPG GVNSPVRAFK SVGGTPIYMA KGQGAYMTDV DGNTYLDYVG 
SWGPFILGSM HPRITAALEH TLTKIGTSFG TPIEMEIEIA ELLCQIVPSI EMVRMVNSGT
EATMSAVRLA RGYTSRDKII KFEGCYHGHG DSFLIKAGSG ALTLGAPDSP GVTKGTANDT
LNAKYNDIES VRLLVNENKG NIAAIIIEPV AGNTGVIPAK PGFLQALRDL CTEEGIVLIF
DEVMCGFRVA LGGAQERYGV TPDLTTMGKI IGGGLPVGAF GGKREIMERI APLGDVYQAG
TLSGNPLALT AGLETLKILR DENPYPELER KAAFLEEGFR NNMNKLGLNY VQNRVGSMAC
LFFTETPVTD YDTAVTADLK KYGTYYHAML DQGIYLAPSQ FEAMFTSAVM TDEDLEKTVK
ANYVALQATQ K