Gene Paes_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0182 
Symbol 
ID6460287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp188928 
End bp190025 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content51% 
IMG OID642724175 
Productprotein of unknown function DUF306 Meta and HslJ 
Protein accessionYP_002014888 
Protein GI194333028 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.630616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCA TGCGCAGATT TCGGCTTAAC ATTTTTTTAT TGATGCTGTT ACTGCTCGGC 
AGTTGTTCTC GGGGTTACAA GCTTCCTGTC CAGCCTGATC GTCCTGCTGA ACCTGAGCCT
TTGACTCCTG TGGCCAATGT TACCTATTAC GGTGAGATCC CCTGCGCAGA GTGCAGGGTG
CAGAAGCTCA CGGTGTCGCT GTTCGATGAT GATTCCTTCA GGGTAAAAAG GGTTTATGTC
GGGCTTGCGG GAGGCAAGAA CAAGGTTGAA TATGATCTCG GGCGCTGGCA ACGCCGGGGC
GACAAGCTTG TCCTCAGGGG GAGCGGACGT TTTCCATTGC AGTTCCGTTA TGAGTCTCAA
TCCGAAATCC GCTTGCTTGA TCAGCTGGGA AAGGATATTG TTTCCAGACT GAATTACTCT
CTTTATAAAC GCGATGTTCC TGATTTTCTT GCCGGGCCAA TGAGTCTGAC AGGAATGTTT
TCTATGGAAA ACGGCAAAAC GCTTTTTGTC GAATGCCTTA CAGGCAAGAC ATTTTCTCTT
GTTTTTGAGC GTCCGGACGC TGAGATTACG CGTGGATACG AAGCTTTGCG TTCAGCGCCG
GGAAAAGGAG TTCTTGCCAC GCTTCATGGA CGATTTGAGC TTAAAGCGTC CGGTCAGGGC
AAGGCGGCTG CAGAGCGTAT CATGGTTCAG AGGTTCAACA GTTTTCTCCC CGGCCGCGAC
TGTCGGAAAG TCGAAAAACG TAACGCATCG CTGGAGAATA CGTTCTGGCG CCTTCTGTCT
ATCAAGTCGT TTCCCTCCTC TCTCAATGCT CAGGCCAAAG CGCCCTATAT TATCATGAAA
TCAGGCGATG GTTCTGTTTC CGGTTTTTCG GGCTGTAACC GGCTTGGCGG GGCTTATACA
TCGGGGTCGG CCAGGCTTGA GTTTAAGCGG CTGGTGACAT CGAGAATGGC CTGTCCCGGA
GAGTCGATGG CTCTTGAAAA GGCCTTTGTA GCGGCGCTCG AAAAAACTGC TTCCTGGAGA
ATCAGAGGCA ATATTCTCGA ACTTTATGAT GCGTCATCTG TACCTCTCAT GAGTATGAAG
GTCGTTACGC CTCAATGA
 
Protein sequence
MMIMRRFRLN IFLLMLLLLG SCSRGYKLPV QPDRPAEPEP LTPVANVTYY GEIPCAECRV 
QKLTVSLFDD DSFRVKRVYV GLAGGKNKVE YDLGRWQRRG DKLVLRGSGR FPLQFRYESQ
SEIRLLDQLG KDIVSRLNYS LYKRDVPDFL AGPMSLTGMF SMENGKTLFV ECLTGKTFSL
VFERPDAEIT RGYEALRSAP GKGVLATLHG RFELKASGQG KAAAERIMVQ RFNSFLPGRD
CRKVEKRNAS LENTFWRLLS IKSFPSSLNA QAKAPYIIMK SGDGSVSGFS GCNRLGGAYT
SGSARLEFKR LVTSRMACPG ESMALEKAFV AALEKTASWR IRGNILELYD ASSVPLMSMK
VVTPQ