Gene Paes_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0114 
Symbol 
ID6458514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp117217 
End bp118995 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content54% 
IMG OID642724101 
Productasparagine synthase family amidotransferase 
Protein accessionYP_002014821 
Protein GI194332961 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TTGCAGGAGA ACTCCGATTC GATAGTGCAG CAGCCTCTTC AACGACTGTC 
GACGCAATGC TCGGCATTCT TGAGCCAAGA GGACCTGACG CACAGGGAGT CTTCGCCCAC
AACAGGATCT GTTTCGGGCA CCGGCGTCTG AAAATCATCG ATCTTTCAGA CTGCGCATCC
CAACCGATGG TCGATAGTGC TCTCGGTCTG GTTCTCGTCT TCAACGGCGC CGTCTACAAC
TACCGGGAAC TTTGTACAGA ACTCGTCGGG AAAGGCTACA GCTTCTTCTC TCAATCAGAT
ACAGAGATCA TTATCAAGGC GTACCACGCC TGGGGAGAAG ATTGTGTCGG CCACCTGCAG
GGAATGTTTG CGTTTGCCAT CTGGGAACGC GATACAGGCA GAACGTTTTT TGCCCGTGAC
CGCCTTGGAA TCAAACCCCT CTACTTCACA GAGGATAACG CCTCGATGCG CTTCGCATCA
TCCCTTCCGG CGCTCCTGAA ATCAGGCGCT GTCGATACGG CTATCGACCC GGCTGCGCTC
GACTGCTATA TGAGTTTTCA CTCGGTCGTT CCAGCCCCCT GGACCATCTT TCGGGGCATA
CGCAAGCTGC CGCCGGCAAC AACCATGATG GTCGAGCCTG ACGGCAGGAA ACAGCAGCGA
ACTTACTGGC AACCAGACTA CTCACGATCG GATGAAGAAC GCAGGCGAAG TGCCGGAGAG
TGGATTGATG CCGTCCATGA TGCGCTGAAG CTTGCTGTAC AACGCCGTTT GGTAGCAGAC
GTACCGGTAG GAGTTCTGCT TTCCGGAGGT CTTGACTCAT CTCTGGTTGT CGGACTGCTC
AGTGAACTCG TGCAACGCCA CCTCAGCACC TTCTCCGTCG GCTTCGAGGA TGTCGCCGAA
GAGGAAGGCA ACGAGTTCCG GTATTCCGAC ATCATCGCTG AACGCTACAG CACCGATCAC
CATAAAATCT TCGTTGACCA CAGAGAACTG CAGACCCATC TCTCAGACTG CGTCAGAGCG
ATGTCGGAAC CGATGGTAAG CCACGATGTA ATAGGATTCT ACCTCCTCTC GCGCGAAGTC
AGCCAACACG TCAGGGTAGT GCAGAGCGGC CAGGGCGCCG ACGAGGTCTT CGCCGGGTAC
CACTGGTATC CGCCGATGAT GAACACTCCG CCGACAGAGG CATACAGCAC CTACTCAGGC
GTTTTCTTCG ACCGCGACTT CAACGAATAC CGTCAGGCTG TCAACAGTTC GTTTATCACC
GAAGACCACG CTGCTGCATT TGTCAGAAAC CACTTTGCCA TGCCGGGTGC CGAAGAACCC
ATCGACAAGG CGCTCCGGCT CGACAGTACC ATCATGCTCG TTGACGATCC GGTCAAAAGG
GTAGACAACA TGACCATGGC ATGGGGGCTT GAGGCCAGAG TACCGTTTCT TGATCATGAA
CTGGTTGAAC TGGCAGCAAA AATTCCCGCA GAATACAAAG TCAAGGACGG CGGCAAATAC
GTACTCAAGG AGGTAGGCCG CAGGATCATT CCTCACGAGG TGATCGACCG CCCGAAAGGC
TACTTTCCCG TCCCTGCGCT CAAGTATCTC GAAGGGGAAT ACCTTGACAT GGCAAAAAAT
ATTCTCAACC AGGATGCAGC AAAACAACGC AAAATCTTCA ACAGAGAGTA TGTCGATATG
CTGCTCAATG CGCCTCAAGA TCATATCACT CCGCTCAGAG GATCGAAACT CTGGCAGATA
ACACTCCTTG AATACTGGCT GCAGGAGCAG GGACTATGA
 
Protein sequence
MCGIAGELRF DSAAASSTTV DAMLGILEPR GPDAQGVFAH NRICFGHRRL KIIDLSDCAS 
QPMVDSALGL VLVFNGAVYN YRELCTELVG KGYSFFSQSD TEIIIKAYHA WGEDCVGHLQ
GMFAFAIWER DTGRTFFARD RLGIKPLYFT EDNASMRFAS SLPALLKSGA VDTAIDPAAL
DCYMSFHSVV PAPWTIFRGI RKLPPATTMM VEPDGRKQQR TYWQPDYSRS DEERRRSAGE
WIDAVHDALK LAVQRRLVAD VPVGVLLSGG LDSSLVVGLL SELVQRHLST FSVGFEDVAE
EEGNEFRYSD IIAERYSTDH HKIFVDHREL QTHLSDCVRA MSEPMVSHDV IGFYLLSREV
SQHVRVVQSG QGADEVFAGY HWYPPMMNTP PTEAYSTYSG VFFDRDFNEY RQAVNSSFIT
EDHAAAFVRN HFAMPGAEEP IDKALRLDST IMLVDDPVKR VDNMTMAWGL EARVPFLDHE
LVELAAKIPA EYKVKDGGKY VLKEVGRRII PHEVIDRPKG YFPVPALKYL EGEYLDMAKN
ILNQDAAKQR KIFNREYVDM LLNAPQDHIT PLRGSKLWQI TLLEYWLQEQ GL