Gene Paes_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0107 
Symbol 
ID6458543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp107904 
End bp109361 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content53% 
IMG OID642724094 
Productcation transporter 
Protein accessionYP_002014814 
Protein GI194332954 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTC CTGCCATTGC CAACGTTCTC GGAACGCTGC TCATGTTTAT CGGCAGCACC 
ATGCTGATTC CTCTGGCATG CGCCCTCATC TATAACGAAG GGGATGCGTT GTCTTTCATG
CTTGCGATGA TGATCACTAT CGGGCTGGCC TTTCCTCTTT GGTGGTTTTT TCGCCGACAG
CGCAACCTGA CGATCCGCGA CGGATTCTTT ATCGTCTCGG TTGGCTGGAT CCTGGTATCG
GCCGTCTCGT CACTGCCCTT TATGATCCAC GGTTCCATCC CGTCATTTAC CGATGCGTTC
TTCGAAATGA TGTCGGGCTA TACAACCACC GGAGCAACCA TTCTCAATGA TGTTGAAGCA
CTCCCGCACG GACTGCTCTT CTGGCGCAGT ATGACACACC TGATCGGAGG CATGGGGTTC
ATCATGGTCA CCATCATTAT CCTGCCGCTC CTGGGCATCG GCGGCATGCA GCTTTACAAG
GCGGAAGCCG ACCCCGGACA GGTCATCACG GGAGAAAAAT TTCTTCCCCG CGTCAAAGAG
GCCGCCATAT GGCTCTGGGC TATCTACCTC GCACTCATCC TCATACAATC GCTGCTCATG
TGGGTCGCAG GCATGCCCCT TTTTGACTCG CTCTGCCACG CTTTCGGCAC CGTATCGACA
TCGGGCTACT CCACAAAAAA CAGTAGTATC GGCTACTTCA ACAACGCATG GATCGACTGG
ATCACCACAA TCTTCATGCT TCTCGGGGGT ATGACGTTCA TGCTCCATTA CCAGATCATC
AAACGGGACT GGGAACCGGT CAAACAGAAT ACGGAATTTC GATGGTATGG GGGATTCGTC
CTCTTTTTCT GTCTCGTGAC GACACTGCTG CTTTTTGCCT CGCCACAGTA CGACAACATT
TTCGACTCAG CACGTTTCGC CACATTCCAG ATCGTCTCCA TCCTGACCAC AACCGGCTTT
ACCACGACGG ATTACGAAGT ATGGCCGCAG GCTGCGCAAA TGTTCATCCT GATCGTCTGC
TTTATCGGCG CCTGTGCCGG ATCGACCACA AGCGGCATCA AGATTGTGCA CTATGAAATC
ATCAGTAAAT ACCTCTATGC CACAGGGAAA AAACTCATGC AGCCCATGGC GGTGGTCCCG
GTCAGAATCA ATGGACGCAT TGCCGAACAA CCGGTCATAA CCCTGGCGGT CAGCTATTTT
ATCATCAACA TCTTCATGGT CTTCATCGGT GCCGCTGTCC TGACGATCTG CGACGACATG
GACCTCTTCA GCTCGATGAC CGCAGTCATC GCAACCCTGT TCAATATCGG ACCTGGTTTC
GGTGATGTCG GCCCGACACA CACCTTTGCG CATATATCGG AGATCGGCAA GTGGTTTTTA
TCCTTCAACA TGCTTACCGG CCGCCTCGAA ATGTTCTCCG TGCTGGTCAT GTTCTATCCG
TCATTCTGGA AAGGGTGA
 
Protein sequence
MNFPAIANVL GTLLMFIGST MLIPLACALI YNEGDALSFM LAMMITIGLA FPLWWFFRRQ 
RNLTIRDGFF IVSVGWILVS AVSSLPFMIH GSIPSFTDAF FEMMSGYTTT GATILNDVEA
LPHGLLFWRS MTHLIGGMGF IMVTIIILPL LGIGGMQLYK AEADPGQVIT GEKFLPRVKE
AAIWLWAIYL ALILIQSLLM WVAGMPLFDS LCHAFGTVST SGYSTKNSSI GYFNNAWIDW
ITTIFMLLGG MTFMLHYQII KRDWEPVKQN TEFRWYGGFV LFFCLVTTLL LFASPQYDNI
FDSARFATFQ IVSILTTTGF TTTDYEVWPQ AAQMFILIVC FIGACAGSTT SGIKIVHYEI
ISKYLYATGK KLMQPMAVVP VRINGRIAEQ PVITLAVSYF IINIFMVFIG AAVLTICDDM
DLFSSMTAVI ATLFNIGPGF GDVGPTHTFA HISEIGKWFL SFNMLTGRLE MFSVLVMFYP
SFWKG