| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0055 |
|---|
| Symbol | |
|---|
| ID | 6459120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 59965 |
|---|
| End bp | 61512 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642724048 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002014768 |
|---|
| Protein GI | 194332908 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1
[COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATG GTTTTGTCAT CGACGGCCGA AAGTGCATCG GGTGCCATGC ATGTACGGTA
GGCTGCAAGT CCGAAAACCA GGTGCCGCTC GGCGTGAACC GTACCTGGGT GAAATATGTG
GAAAAGGGAA AGTTTCCCGA TACCCGCCGA TATTTCACGG TTCTTCGCTG TAACCACTGC
GAAGATCCTC CCTGTGTCAA CATCTGTCCT GTCGAAGCGC TGCAGAAGCG CGAGGACGGA
ATCGTCGATT TCGATAAACG CCGCTGTATC GGCTGTAAGG CCTGCGGTCA GGCGTGTCCT
TACGGCGCGC TCTACATCGA TCCTGAAAGC CATACGAGCG CTAAGTGCAA TTACTGTGCG
CATCGCAAAG AGGTCGGCAT GAAGCCCGCA TGCGTGGTGA TCTGTCCGCA GCAGGCGATC
GTTTCAGGCG ATCTGGACGA TCCTCACAGC CAGATCAGCC AGCTGGTGGC GACCGAGCAG
ACCGTGGTGC GTAAACCTGA AAAAGGGACA TCGCCCAACG TTTTCTATAT CAACGGAGAT
GGTGCGTCGC TTGATCCTCT GCAGACCGAG ATCGGGCGCC CCTATTTGTG GAGCGAGCAA
TCGCGGGGTG TCGGTCATTT TGTCGGCAAA GAGCTTCAGG GTTCGCTCAG GTCGGATACC
GGAAAGCCTG ACGACGGGAC GGCTGCCCGC AGGGTTTACG ATGCTCCGTC AAAAGGGGTT
GTCTGGGGAT GGGAGGTTCC TGCATATGTT TGGTCAAAAG GGATCTCTTC AGGTATTTTT
ATGCTGCTTT TCGTCTTGAC GGTTTTCCTT TCGGCACCGC TTTCAGCGCC CATGCAGTGG
GCGTCGTGGG CTGTTTCTCT CGTGTTTCTC GGTTTTACCG GAGCCTTTCT GATTCGCGAT
CTGGATCGTC CGGACCGTTT TTCTTCCGTC ATGCTGCGCC CCCAGTTCAA ATCCTGGCTT
GTTCGCGGCG GATATAGTAT CGGCGGTTTC GGTGCGCTGC TGGCGCTCTG GGGAGCGGCA
AGATTGCTGC ACAGCCCGCT TCTTGAAACG GTCTCGCTCT GGGGTGGAGC GTTATTTGCG
CTTATCACGT CGGTCTATAC TGCCTTTCTT TTCGCCTCGG CAAAAGGTCG CGATTTCTGG
CAAAGTCCGG TGATGGTTAT TCATATGCTG GTAACCTCCC TTGTTGCAGG CGCCTCAGCC
ATGCTTCTGC TTGCTGTCGC GTTCGGCGCA GAAGCATCGA TTCAGAGCAT CCTGACGGGC
GGAATTGCCG GAGGTGTGAT GCTCAATATC GTGATCATGC TTTCCGAACT GTTTGGCCGT
CATCCCTCAA AACAGGCGGA AGCTACCGCA CACCTCATGA CGCACGGCGC ATTGAAACAG
CAGTTCTGGG GTGGTTGCAT AGCGCTCGGC CATCTCGCTC CGCTGGTTCT CCTTCTTTTC
GGTGCAGGGC CTTTTGTTGC CGTAGCAGCC GCACTGCTTG CCCTTTCGGG AGTCTACTAT
ACCGAAAAGC TCTGGGTCAA GGCCCCACAG TTAATCTCTT TACACTAA
|
|---|
| Protein sequence | MNYGFVIDGR KCIGCHACTV GCKSENQVPL GVNRTWVKYV EKGKFPDTRR YFTVLRCNHC
EDPPCVNICP VEALQKREDG IVDFDKRRCI GCKACGQACP YGALYIDPES HTSAKCNYCA
HRKEVGMKPA CVVICPQQAI VSGDLDDPHS QISQLVATEQ TVVRKPEKGT SPNVFYINGD
GASLDPLQTE IGRPYLWSEQ SRGVGHFVGK ELQGSLRSDT GKPDDGTAAR RVYDAPSKGV
VWGWEVPAYV WSKGISSGIF MLLFVLTVFL SAPLSAPMQW ASWAVSLVFL GFTGAFLIRD
LDRPDRFSSV MLRPQFKSWL VRGGYSIGGF GALLALWGAA RLLHSPLLET VSLWGGALFA
LITSVYTAFL FASAKGRDFW QSPVMVIHML VTSLVAGASA MLLLAVAFGA EASIQSILTG
GIAGGVMLNI VIMLSELFGR HPSKQAEATA HLMTHGALKQ QFWGGCIALG HLAPLVLLLF
GAGPFVAVAA ALLALSGVYY TEKLWVKAPQ LISLH
|
|---|
| |