| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0020 |
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| Symbol | dapD |
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| ID | 6458381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 22582 |
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| End bp | 23445 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642724012 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_002014733 |
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| Protein GI | 194332873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000149214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000215065 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGAAG ATAAAAATGT GTTAGAAAAG AAGATTGAAG CGCTTTCGGC ACTCTCCGCT
TCGGAACTCA AGGCAGAGAG CGGGGCACGC AACGTTTTTG CCGCATTCAA ACAGATGCTC
AACGAAGGCA CAATCCGCGC GGCTGAAAAG ATCGACGGTA CCTGGAGGGC CAATACCTGG
GTCAAGAAAG GCATTCTTCT CGGCATGAAG CTGGGCAGCA TGCAGGAAAA TACCATTCAG
TTCCGAGGAT ATTACGACTG GACCTTTATC GATAAGGATA CCTATCCTCT CAAGCGATTC
ACCAAGGATG ACGGAGTGCG TCTCGTTCCC GGAGGCTCCT CTGTCCGTGA CGGAGCCTGG
CTTGCGCCTT CCGTGGTCAT GATGCCTCCG GCATACGTTA ATGTCGGGGC ATATGTCGAT
GCCGGCACCA TGATCGACTC TCATGCGCTT GTAGGAAGCT GTGCGCAGAT AGGCCGTAAC
GTGCATCTTT CCGCAGCAGT CCAGATCGGA GGCGTCCTCG AGCCTATCGG CGCGGTTCCT
GTTGTCGTTG AAGATGATGT TATGATAGGC GGAAACTGCG GGATTTACGA GGGAACAATT
GTCTCGACCC GTGCTGTTAT CGGTACCGGT GTCATCCTGA ACGCTTCGAC GCCGGTCTAT
GATATTGTCA ACGAGTGCAT CATCCGCAAA ACGCCGGATT CTCCGCTCAT CATTCCGGAG
GGTGCGGTTG TTGTTGCCGG TTCGCGCAAG GTAAAGGGGG ATTTTGCCGC AGAAAACGGC
CTGTCCATCT ATACCCCTAT GATCATCAAA TACCGCGATG AGAAAACCGA CAGCGCGACA
GCCCTTGAAA GCGCTTTGCG CTGA
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| Protein sequence | MIEDKNVLEK KIEALSALSA SELKAESGAR NVFAAFKQML NEGTIRAAEK IDGTWRANTW
VKKGILLGMK LGSMQENTIQ FRGYYDWTFI DKDTYPLKRF TKDDGVRLVP GGSSVRDGAW
LAPSVVMMPP AYVNVGAYVD AGTMIDSHAL VGSCAQIGRN VHLSAAVQIG GVLEPIGAVP
VVVEDDVMIG GNCGIYEGTI VSTRAVIGTG VILNASTPVY DIVNECIIRK TPDSPLIIPE
GAVVVAGSRK VKGDFAAENG LSIYTPMIIK YRDEKTDSAT ALESALR
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