Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_rna52 |
Symbol | |
ID | 6308249 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4861404 |
End bp | 4862938 |
Gene Length | 1535 bp |
Protein Length | |
Translation table | |
GC content | 55% |
IMG OID | 642641973 |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00245736 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGAGTTTGAT CCTGGCTCAG AGTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAAC GGCAGCACAG TAAGAGCTTG CTCTTATGGG TGGCGAGTGG CGGACGGGTG AGGAATACAT CGGAATCTAC TCTTTCGTGG GGGATAACGT AGGGAAACTT ACGCTAATAC CGCATACGAC CTACGGGTGA AAGCGGAGGA CCTTCGGGCT TCGCGCGATT GAATGAGCCG ATGTCGGATT AGCTAGTTGG CGGGGTAAAG GCCCACCAAG GCGACGATCC GTAGCTGGTC TGAGAGGATG ATCAGCCACA CTGGAACTGA GACACGGTCC AGACTCCTAC GGGAGGCAGC AGTGGGGAAT ATTGGACAAT GGGCGCAAGC CTGATCCAGC CATGCCGCGT GGGTGAAGAA GGCCTTCGGG TTGTAAAGCC CTTTTGTTGG GAAAGAAAAG CAGTCGGTTA ATACCCGATT GTTCTGACGG TACCCAAAGA ATAAGCACCG GCTAACTTCG TGCCAGCAGC CGCGGTAATA CGAAGGGTGC AAGCGTTACT CGGAATTACT GGGCGTAAAG CGTGCGTAGG TGGTGGTTTA AGTCTGTTGT GAAAGCCCTG GGCTCAACCT GGGAATTGCA GTGGATACTG GGTCACTAGA GTGTGGTAGA GGGTAGCGGA ATTCCCGGTG TAGCAGTGAA ATGCGTAGAG ATCGGGAGGA ACATCAGTGG CGAAGGCGGC TACCTGGACC AACACTGACA CTGAGGCACG AAAGCGTGGG GAGCAAACAG GATTAGATAC CCTGGTAGTC CACGCCCTAA ACGATGCGAA CTGGATGTTG GGTGCAATTT GGCACGCAGT ATCGAAGCTA ACGCGTTAAG TTCGCCGCCT GGGGAGTACG GTCGCAAGAC TGAAACTCAA AGGAATTGAC GGGGGCCCGC ACAAGCGGTG GAGTATGTGG TTTAATTCGA TGCAACGCGA AGAACCTTAC CTGGTCTTGA CATCCACGGA ACTTTCCAGA GATGGATTGG TGCCTTCGGG AACCGTGAGA CAGGTGCTGC ATGGCTGTCG TCAGCTCGTG TCGTGAGATG TTGGGTTAAG TCCCGCAACG AGCGCAACCC TTGTCCTTAG TTGCCAGCAC GTAATGGTGG GAACTCTAAG GAGACCGCCG GTGACAAACC GGAGGAAGGT GGGGATGACG TCAAGTCATC ATGGCCCTTA CGACCAGGGC TACACACGTA CTACAATGGT AGGGACAGAG GGCTGCAAAC CCGCGAGGGC AAGCCAATCC CAGAAACCCT ATCTCAGTCC GGATTGGAGT CTGCAACTCG ACTCCATGAA GTCGGAATCG CTAGTAATCG CAGATCAGCA TTGCTGCGGT GAATACGTTC CCGGGCCTTG TACACACCGC CCGTCACACC ATGGGAGTTT GTTGCACCAG AAGCAGGTAG CTTAACCTTC GGGAGGGCGC TTGCCACGGT GTGGCCGATG ACTGGGGTGA AGTCGTAACA AGGTAGCCGT ATCGGAAGGT GCGGCTGGAT CACCT
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Protein sequence | |
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