Gene PXO_rna52 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_rna52 
Symbol 
ID6308249 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4861404 
End bp4862938 
Gene Length1535 bp 
Protein Length 
Translation table 
GC content55% 
IMG OID642641973 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00245736 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGAGTTTGAT CCTGGCTCAG AGTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAAC 
GGCAGCACAG TAAGAGCTTG CTCTTATGGG TGGCGAGTGG CGGACGGGTG AGGAATACAT
CGGAATCTAC TCTTTCGTGG GGGATAACGT AGGGAAACTT ACGCTAATAC CGCATACGAC
CTACGGGTGA AAGCGGAGGA CCTTCGGGCT TCGCGCGATT GAATGAGCCG ATGTCGGATT
AGCTAGTTGG CGGGGTAAAG GCCCACCAAG GCGACGATCC GTAGCTGGTC TGAGAGGATG
ATCAGCCACA CTGGAACTGA GACACGGTCC AGACTCCTAC GGGAGGCAGC AGTGGGGAAT
ATTGGACAAT GGGCGCAAGC CTGATCCAGC CATGCCGCGT GGGTGAAGAA GGCCTTCGGG
TTGTAAAGCC CTTTTGTTGG GAAAGAAAAG CAGTCGGTTA ATACCCGATT GTTCTGACGG
TACCCAAAGA ATAAGCACCG GCTAACTTCG TGCCAGCAGC CGCGGTAATA CGAAGGGTGC
AAGCGTTACT CGGAATTACT GGGCGTAAAG CGTGCGTAGG TGGTGGTTTA AGTCTGTTGT
GAAAGCCCTG GGCTCAACCT GGGAATTGCA GTGGATACTG GGTCACTAGA GTGTGGTAGA
GGGTAGCGGA ATTCCCGGTG TAGCAGTGAA ATGCGTAGAG ATCGGGAGGA ACATCAGTGG
CGAAGGCGGC TACCTGGACC AACACTGACA CTGAGGCACG AAAGCGTGGG GAGCAAACAG
GATTAGATAC CCTGGTAGTC CACGCCCTAA ACGATGCGAA CTGGATGTTG GGTGCAATTT
GGCACGCAGT ATCGAAGCTA ACGCGTTAAG TTCGCCGCCT GGGGAGTACG GTCGCAAGAC
TGAAACTCAA AGGAATTGAC GGGGGCCCGC ACAAGCGGTG GAGTATGTGG TTTAATTCGA
TGCAACGCGA AGAACCTTAC CTGGTCTTGA CATCCACGGA ACTTTCCAGA GATGGATTGG
TGCCTTCGGG AACCGTGAGA CAGGTGCTGC ATGGCTGTCG TCAGCTCGTG TCGTGAGATG
TTGGGTTAAG TCCCGCAACG AGCGCAACCC TTGTCCTTAG TTGCCAGCAC GTAATGGTGG
GAACTCTAAG GAGACCGCCG GTGACAAACC GGAGGAAGGT GGGGATGACG TCAAGTCATC
ATGGCCCTTA CGACCAGGGC TACACACGTA CTACAATGGT AGGGACAGAG GGCTGCAAAC
CCGCGAGGGC AAGCCAATCC CAGAAACCCT ATCTCAGTCC GGATTGGAGT CTGCAACTCG
ACTCCATGAA GTCGGAATCG CTAGTAATCG CAGATCAGCA TTGCTGCGGT GAATACGTTC
CCGGGCCTTG TACACACCGC CCGTCACACC ATGGGAGTTT GTTGCACCAG AAGCAGGTAG
CTTAACCTTC GGGAGGGCGC TTGCCACGGT GTGGCCGATG ACTGGGGTGA AGTCGTAACA
AGGTAGCCGT ATCGGAAGGT GCGGCTGGAT CACCT
 
Protein sequence