Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_06218 |
Symbol | |
ID | 6306318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2874376 |
End bp | 2877402 |
Gene Length | 3027 bp |
Protein Length | 1008 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642640079 |
Product | Rhs family protein |
Protein accession | YP_001913938 |
Protein GI | 188577009 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.374255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCGG CGACGACCGA CTACAACCAA CTGCAACTGG TGCTTCCCAA CGGCGCAGCG ATCCCATTCG ATCGCCTTTC TGGAAGCGGG CTGGCTGGTC GCTGGGCACA GTCCGGTTCC ATTTCCGGCT ATGCCGGCGC CACCATCGAG CAGGGCACGG CCTCAGGGCA CGGCTACTTG CTCACGCTAC GCGACGGCAG CAAGATGTAT TTCAACCAGT ACTCGCCAAA CCGCTTGGAA TGGACCACCG ATCGGTTTGG CAATCGGGTT GACTATGTCT ACGACGCGGG ACTGGTGTCG CGCATCGTCT CTGCAAATGG ACGTTATCTG GACATTGACT ACGACAGCGA CAATCGGATC AGCACGATCG CTGATCCATT GGGCAATACG TGGTCCTATG TCTACGACAG CTACGGCTAT CTATCCAGCC TGACCCGCGC CGACGGCAGC ATGCGCAAGT TCACCTACAA ACGCCGCGCC GCCACGAATA CGCTACCGCT GCAGGTGCGG CTCGAGTCCA TCTACGATGG CAAAAACCAG CGTGTATTGC TGAATGGATT CGAGAGCGCC AACGGTAGCT GGACTGGCCG GGTGGTCAAA CAGACCCAGG CCGACGGCGG CGTGCTGATG ATCGACTACG CGCACGTGGA CGGCAGCACG ACAGGTGTGC TTGTGACCAA GCCGGATGGC AGCGCGCGGC GGGTGGTGTT CGATCAGGTC AGCCATTACC CACTGACCGA CACCCAGGCG TATGGCACGG CGTTGGCGCA GACCACGACC TATGAGCGCA GCGCGGGCGG GCAGATCACG GCCCGTATCG ACGCGCTGGG ACGACGCACC GAGTACCGTT ACGACAGTGC CGGACGTACG ACGCAGATCA AAGCAATGGC CGGTACGACA CAGGTACGTA CGACCACGTT GTCCTATACC GTCGAGGGCG ACCTCGCCAC GATCGTCGAT CCGCTGAACC GCAAGACCAG CTTCGGCTAC ACGCAGCGTT GCCTGACCTC GGTCACCAAT CCGCTTGGCA AGGTGAGCAA GGCCACCTGT AATGCCGCAG GCCAACGCCT GAGCATGGCA GACCCGCTGG GCCACACTAC CACCTTGACG TGGACCGGCG AAGACCTCAC CCAGGTCAGT GACGCGTTGG GCCGGAACCT GAGGTTCCGC TATGACGCAC TGGGCCGGAT GATCGCCTCG GCAGACGCGC AGGGCAACCT CTCGCGACGC GAGTACGATC CGTTGAGCCG CGTGGTGAAA TCGATCGACC CACTGGGCAA TGTAGTGGAG ACCGGCTTCG ATGCGAACGG CAATGTCACT GCAATCCTGC TGCCGCACGG CAACGGCGTG ACGTATACAT ATGACACGCG CGACCGGCGC GTCTCGCGGA CCGACGCACT GGATCAGGTG GAGCGCTGGG TCTACGACAC GATGGACCGC GTGGTGCGCT ATACCGACCG GCGCACGCGC GTCACCACCT ATGCCTACGA CACGCTGGGC CGGCTGACCA CGACCACGCT GCCGGGCATG GGCGGCACGT TGGCTGCCAG CTACGACAGC GGCAACCGGA TGGTGGCGCT GGCCGACAGT CTTTCCGGCA CATTGAGCTG GACTTACGAT TCCTTCGACG AGCTCACCCA GGCCAACGGC CCGCAGGGCA TGGTCGGCTA CACCTATGAT GCGGTGGGTC GTCGCACCGG CATGCAGGCC GACACGCAGG CGCAGGTGCT TTACAGCTAC GACGTAGGCG ACCGCCTGAC CGGCATCAGC CAGGGCAGCG AGTCGGTCAG CTTCGCCTAC GACAACGCCA ATCGACTCAC TAGCCAGACG CTGCCCAATC AGGTACAGAC CGTCTACACC TACAACAACG CCAACCAGAT GACCGGCCTT GCGTGGGGCA AGGCGGGGCA GACGGCGTTG GGCAGCCTGG GCTATGGCTA CGACAGCATC GGCCAGTTGG TGGCGCAGAC CGGTACGCAT GCGCCGCAAG CCTTGCCGCC CTCCAGCAGT GGCAATGTCT TCGACGACAA TAATCGGCAG ACGCAGGCGA GCACTGTCGC GCTGAGCTAC GATGCCAACG GCAACCTGCT CAGTGATGGC AGCCGCACCT ATGTCTGGGA CGACCGCGAC CGACTGAGCC AGATCCAGCA GGGCGGCACC ACGATTGCCA GTTTCAGTTA CGACGCGCTG GGCCGTCGCA TCTCAAGGAG CGAGGCCGGC ACGACCACCA ATTATTTGTA CGACGGACAG AATGTGGTGC AGGAAACGCA GGGCAGCACG GTCAATCCGA TCCTGACCGG CCTGGGCATC GATCAACGTT ACGCCCGCAA CGACACCGGC GGGCGGACGT ACTTCCTGAC CGATATGCTG GGCAGCACGC GGTTGCTGAC GGATGCGGGC GGTAGCGCTG TGCAGCGGTA TGAGTATGAT CCGTATGGGG CAACCAGTCA GAGCAGCACG GCGTATACGA ATCCGTACCA GTACACGGGG CGGGAGAAGG ATATAAACGG CTTGTACTAC TACCGTGCGA GATACTATCG GCCGGATTTG GGTGGTTTTA TAAGCGAGGA CCCGATCCAA TTGGCTGGAG GAGTCAATCA ATATATGTAT GTTAATGGAA ATCCAATAAT TAACGTTGAT CCATTTGGGC TTCGGGTAGA TCTGATAAAG ATGATTGACT ATATGAATGC TCACGCTAAC CGTAAATCTA AGGGGCAGTG TGCGAAATAC GTGCGCCAAG GTCTTGAGGC TGGCGGTGCG GATACAAGCG GTCACCCGAT AGCTGCAGCT GACTATGGCT TGACCCTCGA AAAAAATGAT TTCTCGCCGA TAGATCCGTC AGCCGCGCCT GAGTCTGGAG ATATAACGGT TTTTCCTGCA ATTCCGGGAC ACCCGTACGG GCACATTGAA GCATACGACG GCTCGTCTTA TGTGTCCGAT TTTTCTCAGT CGAATTTTTA TCCGTCACCC GCTTATGAAG GTTCCGGTCC TGTTACTTAC AGGCTTAATC CAGGGTCTTC ATTGTAA
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Protein sequence | MYSATTDYNQ LQLVLPNGAA IPFDRLSGSG LAGRWAQSGS ISGYAGATIE QGTASGHGYL LTLRDGSKMY FNQYSPNRLE WTTDRFGNRV DYVYDAGLVS RIVSANGRYL DIDYDSDNRI STIADPLGNT WSYVYDSYGY LSSLTRADGS MRKFTYKRRA ATNTLPLQVR LESIYDGKNQ RVLLNGFESA NGSWTGRVVK QTQADGGVLM IDYAHVDGST TGVLVTKPDG SARRVVFDQV SHYPLTDTQA YGTALAQTTT YERSAGGQIT ARIDALGRRT EYRYDSAGRT TQIKAMAGTT QVRTTTLSYT VEGDLATIVD PLNRKTSFGY TQRCLTSVTN PLGKVSKATC NAAGQRLSMA DPLGHTTTLT WTGEDLTQVS DALGRNLRFR YDALGRMIAS ADAQGNLSRR EYDPLSRVVK SIDPLGNVVE TGFDANGNVT AILLPHGNGV TYTYDTRDRR VSRTDALDQV ERWVYDTMDR VVRYTDRRTR VTTYAYDTLG RLTTTTLPGM GGTLAASYDS GNRMVALADS LSGTLSWTYD SFDELTQANG PQGMVGYTYD AVGRRTGMQA DTQAQVLYSY DVGDRLTGIS QGSESVSFAY DNANRLTSQT LPNQVQTVYT YNNANQMTGL AWGKAGQTAL GSLGYGYDSI GQLVAQTGTH APQALPPSSS GNVFDDNNRQ TQASTVALSY DANGNLLSDG SRTYVWDDRD RLSQIQQGGT TIASFSYDAL GRRISRSEAG TTTNYLYDGQ NVVQETQGST VNPILTGLGI DQRYARNDTG GRTYFLTDML GSTRLLTDAG GSAVQRYEYD PYGATSQSST AYTNPYQYTG REKDINGLYY YRARYYRPDL GGFISEDPIQ LAGGVNQYMY VNGNPIINVD PFGLRVDLIK MIDYMNAHAN RKSKGQCAKY VRQGLEAGGA DTSGHPIAAA DYGLTLEKND FSPIDPSAAP ESGDITVFPA IPGHPYGHIE AYDGSSYVSD FSQSNFYPSP AYEGSGPVTY RLNPGSSL
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