Gene PXO_06187 details

Gene Information

• Locus tag: PXO_06187
• Symbol: fliH
• ID: 6306287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2841639
• End bp: 2842259
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 642640048
• Product: flagellar assembly protein FliH
• Protein accession: YP_001913907
• Protein GI: 188576978
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1317] Flagellar biosynthesis/type III secretory pathway protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00312706
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGACG TGGTCACCCG CTGGCTGGCC CCGGACCTGC ACCTGGTCCC GGCCGGGCCG 
GAAACCGAAT TCGACGAAGC GGCCGTTTAT GAGCCGGTGC TGCGTGCGCC GACCCTGGAA 
GAGATCCAGG CCATCGAAGA TGCCGCCCAG CAGGAGGGCT TCGCCCGTGG GCATGCCGAA 
GGCTTCGCCC AGGGCCAGTC GGAAGTGCGG CGCCTGACCG CGCAGATCGA CGGCATCCTG 
GACAACTTCA CCCACCCGCT GGCGCGGCTG GAAAACGAAG TGGTCGGCGC GCTCGGCGAG 
CTGGCCGTGC GCATCGTCGG TCAGCTGGTC GGACGTGCCT ATCAAGCCGA TCCGCAGCTG 
CTGGCCGAGC TGGTCGGCGA AGCGGTGGAT GCGGTCGGCG GTGCCGGCCG CGAGGTCGAA 
GTCCGCCTGC ACCCGGACGA CATCACCGCG CTGCTGCCGT ATCTGGCGCC CAGCAGCACC 
ACCCGCGTGG CCCCAGACAT GAGCCTGAGC CGCGGCGACC TGCGTGTGCA CGCTGAAAGC 
GTGCGCATCG ACGGCACCCT GGATGCGCGC CTGCGGGCCG CACTGGAGAC AGTCATGCGC 
AAATCCGGAG CGGGCCTGTG A 

 

Protein sequence

MNDVVTRWLA PDLHLVPAGP ETEFDEAAVY EPVLRAPTLE EIQAIEDAAQ QEGFARGHAE 
GFAQGQSEVR RLTAQIDGIL DNFTHPLARL ENEVVGALGE LAVRIVGQLV GRAYQADPQL 
LAELVGEAVD AVGGAGREVE VRLHPDDITA LLPYLAPSST TRVAPDMSLS RGDLRVHAES 
VRIDGTLDAR LRAALETVMR KSGAGL