| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06062 |
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| Symbol | ccmA |
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| ID | 6306167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2718100 |
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| End bp | 2718744 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642639929 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_001913788 |
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| Protein GI | 188576859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0966414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC CGCTGCACAC CGCACCGCCG CTGTTGGCGG CGCACGCCCT GGCCTTCAGC
CGCAACGAGG AGCCGGTGTT CGGCCCGCTG GATTTCCACG TCGATGCCGG CGAAGCGCTG
CTGGTGCAAG GCGACAATGG CGCTGGCAAG ACCACGCTGC TGCGCGTGCT GGCCGGCCTG
TTGCATGTGG AACACGGGCA GATCCAGATC GATGGCAAAA CCGCCAAGCG TGGCGACCGC
AGCCGCTTCA TGGCCTACCT GGGCCACCTG CCCGGCCTGA AGGCCGACCT CAGCACGCTG
GAAAACCTGC ACTTCCTATG CGGACTGCAT GGCCGCCGCG CCAAGCAGAT GCCCGGCAGT
GCGCTGGCCA TCGTCGGCCT GGCCGGTTAC GAAGATGCGC TGGTGCGGCA GTTGTCGGCC
GGCCAACGCA AGCGCCTGGC ACTGGCACGG CTGTGGCTGT CGCCGGCGCC GCTATGGTTG
CTGGACGAGC CCTACGCCAA TCTGGATCTG GACGGCATCA CCCTGGTCAA CCGGATGATC
TCCGCGCATC TGCGCGGCGG CGGTGCGGCG CTGGTCACCA CCCACGGCGC TTACGCGGCG
CCGCCGGTGC GCACGCGCAT GCTCACGCTG GAGGCGGCGG CATGA
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| Protein sequence | MIEPLHTAPP LLAAHALAFS RNEEPVFGPL DFHVDAGEAL LVQGDNGAGK TTLLRVLAGL
LHVEHGQIQI DGKTAKRGDR SRFMAYLGHL PGLKADLSTL ENLHFLCGLH GRRAKQMPGS
ALAIVGLAGY EDALVRQLSA GQRKRLALAR LWLSPAPLWL LDEPYANLDL DGITLVNRMI
SAHLRGGGAA LVTTHGAYAA PPVRTRMLTL EAAA
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