Gene PXO_05426 details

Gene Information

• Locus tag: PXO_05426
• ID: 6303699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 175929
• End bp: 176507
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642637492
• Product: transposase (IS4 family)
• Protein accession: YP_001911377
• Protein GI: 188574448

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCACTTGA ATCTTGAGAC TGCCCTCACC TTGCTGGACA TGGTGGTTGC CGGGAAACAG 
CAGGGATCGC CCGGCGCGGA AAAACGCTTC CTGCAGCAGC TCAGGGCACT GATTCCAGAC 
GATGTGCGTC CGATCCTGGT CACTGACGCC GGATTCCGCA CGCCCTGGTT TCGCGCGGTG 
TCGGCGATGG GCTGGGACTG GGTCGGGCGT CTGCGCGGGC GCACGCAGGT CAAACCGCAA 
GACGTGCCCG ATGATGCAGC GCAATGGGTC GATAGTCGTC GTCTGCATGC GCTGGCGTCC 
AACCGTGCAC GCGCATTGCC ACCGATGCAG GCCAATCGCA GCGATCCACG CGATTGCCGT 
CTGGTGCTCT ATGCCAAGAC CCCGCGGGGA CGTCAGCAAC GCAACCAGCG CTCACCCGAC 
AAGGTCTCGC GTGCATCATC CAGTTTGAAA GCAGCAGCGC GTGAGCGCGA GCCGTGGTTG 
ATCGTTGCCT CCCCACAGCT GCAAGCGCCC AGCGCAACGC AGTTGGTCAA ATTGCACGCA 
CGACGGATGC AGATCGAGTT GTGGCATTTC GGGATCTGA 

 

Protein sequence

MHLNLETALT LLDMVVAGKQ QGSPGAEKRF LQQLRALIPD DVRPILVTDA GFRTPWFRAV 
SAMGWDWVGR LRGRTQVKPQ DVPDDAAQWV DSRRLHALAS NRARALPPMQ ANRSDPRDCR 
LVLYAKTPRG RQQRNQRSPD KVSRASSSLK AAAREREPWL IVASPQLQAP SATQLVKLHA 
RRMQIELWHF GI