| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04887 |
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| Symbol | |
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| ID | 6305003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1488300 |
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| End bp | 1489559 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642638776 |
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| Product | pilin biogenesis protein |
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| Protein accession | YP_001912653 |
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| Protein GI | 188575724 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTCG CGCGTAGCGC CATCAAGAAG CAACCGGTCG ACCGGAACAC CAGCATGCTG
CAGACCTTCA TTTGGGAAGG GGCTGACAAG CGTGGCGTGA AGATGAAGGG AGAGCAGACA
GCCCGCAACG CCAATATGTT GCGAGCAGAG CTGCGCCGTC AGGGCATCGT GCCCAGCATG
GTGAAGCAAA AGCCGAAGCC TCTGTTCGGA GGGGCGGGGA AGAAAATTAC CCCTAAAGAA
ATTGCGTTCT TTAGCCGCCA GATGGCGACG ATGATGAAGT CGGGCGTGCC CATCGTCAGT
TCGTTGGAGA TCATTGGCGA GGGACACAAG AACCCACGCA TGAAAAAAAT GGTCGGCCAG
ATCAGGACAG ATATCGAGGG TGGATCCTCG CTCTACGAGT CCATCAGCAA ACATCCCGTT
CAGTTTGACG AGCTCTACCG CAACCTCGTC CGCGCGGGCG AAGGCGCTGG CGTACTGGAG
ACAGTCCTCG AAACGGTCGC TACCTACAAA GAAAACATTG AAGCTCTGAA GGGCAAGATC
AAAAAGGCAC TGTTCTACCC TGCCATGGTG GTTGCAGTGG CAATCATCGT GAGTGCGATT
TTGCTCATCT TCGTGGTGCC TCAGTTCGAG GAAGTATTCA AGAGCTTCGG TGCCGAACTA
CCGGCATTCA CTCAGCTCCT CGTCAACGCA TCGCGCTTCA TGGTCAGCTA TTGGTGGTTG
ATGCTGATAG TGACAGTTGG ATCTGTCGTT GGCTTCATCT TTGCCTACAA ACGTTCTCCA
CGGATGCAGC ATGGACTTGA TCGATTGATC CTCAAGGTGC CCGTAATCGG GCAGATCATG
CACAACAGTG CGATTGCACG CTTTGCACGG ACCACTGCAG TGACATTCAA GGCAGGCGTT
CCTCTAGTTG AGGCACTTGG GATCGTAGCT GGCGCTACTG GCAATAAGCT TTATGAAGAG
GCTGTTTTCA GGATGCGGGA CGATGTGTCT GTGGGTTACC CGGTCAACAT GGCGATGAAA
CAGGTGAACC TATTTCCACA CATGGTTATT CAAATGACTG CGATTGGCGA AGAAGCCGGC
GCACTTGATG CAATGCTCTT CAAAGTGGCT GAATACTTTG AGGAGGAGGT CAATAATGCC
GTGGATGCAC TCAGCAGCCT GCTCGAGCCA CTGATCATGG TCTTCATCGG CACGATCGTC
GGCGGCATGG TCATCGGCAT GTATCTTCCG ATCTTCAAAC TCGGCGCAGT GGTGGGTTAA
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| Protein sequence | MSVARSAIKK QPVDRNTSML QTFIWEGADK RGVKMKGEQT ARNANMLRAE LRRQGIVPSM
VKQKPKPLFG GAGKKITPKE IAFFSRQMAT MMKSGVPIVS SLEIIGEGHK NPRMKKMVGQ
IRTDIEGGSS LYESISKHPV QFDELYRNLV RAGEGAGVLE TVLETVATYK ENIEALKGKI
KKALFYPAMV VAVAIIVSAI LLIFVVPQFE EVFKSFGAEL PAFTQLLVNA SRFMVSYWWL
MLIVTVGSVV GFIFAYKRSP RMQHGLDRLI LKVPVIGQIM HNSAIARFAR TTAVTFKAGV
PLVEALGIVA GATGNKLYEE AVFRMRDDVS VGYPVNMAMK QVNLFPHMVI QMTAIGEEAG
ALDAMLFKVA EYFEEEVNNA VDALSSLLEP LIMVFIGTIV GGMVIGMYLP IFKLGAVVG
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