Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04874 |
Symbol | |
ID | 6305019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1505024 |
End bp | 1505857 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642638792 |
Product | competence lipoprotein |
Protein accession | YP_001912669 |
Protein GI | 188575740 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTCA TGGCGTTCGT CGTCACCGGC TGCCACCGCG GTGCCAAGGA CAAGAATCCC GACGAGGGCA TGCCGGTCGA GCAGCTCTAC GGCAAGGCCC ACAATTTGAT GGAAAAAGGT AACTGGGCGG GTGCCGAAGC CAGCTTCAAG CACCTGATCG CCCAGTACCC GTATGGCCCG TACACCGAGC AGGCGATGAT CGAAAGCGCC TATGCCCAGT ACAAGGCCGG CAAGCACGAC GATACCGTGT CCAGCGTCGA CCGCTTCATC CGGACCTACC CAACCCACCG CAACATCGCG TATCTGTACT ACCTGCGCGG GCTGGCCAAC AGCAATCGCG ACACGGTGTT CCTGCGCCAC GTGTGGTCGT TGGACCCGAG CCGCCGCGAC CTGTCGTCGC CGCAGCAGGC CTATAACGAC TTCAATACCG TCACCGACCG CTACCCGAAC AGCCGCTACG CCGCCGACGC GCGCAAGCGG ATGATCGAGC TGCGCGACGT GTTTGCCCAG CACGAGTTGG ACAATGCGCT GTACTACCTG CGCCGCGATG CCTGGGTGTC TGCTGCGGGC CGCGCCAACT ATCTGCTGGA AACCTATCCG CAGAGCGCCT ATCAGTACGA CGCCGTTGCG GTGCTGGCCG AGGCCTACAC GCACCTGGGC AACAAGACCC TGGCGGCCGA CGCGCGCCGC GTGCTGGAAC TCAACGACCC GAAGCATCCG TGGCTGACCG GCAACTGGCC GAAGTATCCC TTGGTCATCC GCAAGCTCAA CCCGTTTGCC GGCGAAAAAT CTGCTGCGAC CGGGCAAAAC AATTCGCAGA TGAATCGCGA CTGA
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Protein sequence | MLVMAFVVTG CHRGAKDKNP DEGMPVEQLY GKAHNLMEKG NWAGAEASFK HLIAQYPYGP YTEQAMIESA YAQYKAGKHD DTVSSVDRFI RTYPTHRNIA YLYYLRGLAN SNRDTVFLRH VWSLDPSRRD LSSPQQAYND FNTVTDRYPN SRYAADARKR MIELRDVFAQ HELDNALYYL RRDAWVSAAG RANYLLETYP QSAYQYDAVA VLAEAYTHLG NKTLAADARR VLELNDPKHP WLTGNWPKYP LVIRKLNPFA GEKSAATGQN NSQMNRD
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