| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04833 |
|---|
| Symbol | |
|---|
| ID | 6304977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1455663 |
|---|
| End bp | 1457252 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638750 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001912627 |
|---|
| Protein GI | 188575698 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGAT GGCTGAGTGG GGGCGTGCTG ATGGTGGCAA GCTTGGTGGC GACAACGCAC
GCGGCCGAAC TTCCCGCCGG CATGCAGCAG TTCGACGTGC AGATGGAGCG TGTGCGCAAA
CAGTTCGATG TGCCAGGTAT CGCGGTGGCC ATCGTCAAGG ACGGCCAGGT GGTGCTGGAG
CGCGGCTACG GCGTGCGCGA GACAGGCAAG CCCGCGCCGG TGCAGGCCGA CACCTTGTTT
GCCATTGCAT CCAACACCAA GGCCTTCACT GCCGCATCGC TGTCGATCCT GGCCGACGAA
GGCAAGCTCT CGCTCGAGGA CAAGGTCATC GACCATCTGC CGTGGTTTCG CATGTCCGAC
CCGTATGTGG GCGGCGAAAT GCGCATCCGC GATCTGCTGG CGCACCGCAG CGGCCTGAGT
CTGGGGGCGG GCGACCTGTT GTTCTGGCCC ACCACCAGCT ACACCACCGA AGAAGTCGTG
CAGCGCCTGG CCAAGGTGCC GCTGAAGGGC GGTTTTCGCG ACCGTTATGC GTACGACAAC
ATCCTGTACG CGGTCGCGCA AAAGGTGATC GAGCAGGTCT CCGGACAGAG TTACGAGGCG
TTTCTGCAGC AACGTATTTT CGCCCCGGTG GGCATGCGCG GCACGCGCTT CAACGCCGAC
CATCTGCAGG CTGGCGATCA CGCTGCAGTG GGGCATGCCA AGTACGACTT CACCGAGTTG
CGCACGGTGG CGCCGCTGAC CTGGTCCAAC AACTCCGGTG CCGGCGGCAT TTATTCCAGT
GCGCACGACA TGGCGCTATG GATGAACGTG CAACTGGCCG GCGGCATCCT GCCCGATGGC
AAACCCTTGT TCAGCGCCAA GCGTCAGCAC GAGATGTGGT CGATGATCAC GCCGATTCCG
ATCGGTGAGG TGCAGTTGCC CGAGTTTGCC GCGGCACGGC CGAACTTCGC CGGTTACGGC
GAGGGCTGGA GCTTGAGCGA TTACCGTGGC CATCGCATGG TGTGGCATAC CGGTGGCTGG
CCCGGCATGG TGTCGCGCCT CACGCTGCTG CCGGATCAGA AACTGGGCGT GGTGGTGTTG
ACCAACCAGG AAGTGGGCGC CGCATTCAAC GCAGTGACCT TCCAGGTGCT GGATGCGTTC
TTGCGGGTGC CGCCCACCGA TTGGACGGCC GCTTACGCCA AACTGGTGGA AAAGGCCCAC
AGCGATGCCG ATGCCAGCTG GAAGAAGCAC CAGGACGCAC GTGCGGCGCG GTCCACCCCG
TCGTTGCCGC TGCGCAGTTA CGCGGCCACC TACCGCGACC CGTGGTACGG CGATGTGGTG
ATTGTCCAGG ACGGCAAGCG GCTGCGGCTG CAGTTCGCCA AGACCGCCCA ACTCGTGGGC
ACGCTGGAGC ATTGGCAGCA CGACAGCTTC ATCGTGCGCT GGGACGACCG CTCCTTGAAT
GCCGATGCCT TCGTCAATTT CTTGCTGACG CCGGATGGCG CGGTGCGCGA GATGCGCATG
GAGCCGATTT CGCCGCTGAC CGATTTCAGC TTCGATTTCC AGGATCTGGT GCTGACGCCG
GTGCCGACCG AAACCGCTGC GGGCAAGTGA
|
|---|
| Protein sequence | MKRWLSGGVL MVASLVATTH AAELPAGMQQ FDVQMERVRK QFDVPGIAVA IVKDGQVVLE
RGYGVRETGK PAPVQADTLF AIASNTKAFT AASLSILADE GKLSLEDKVI DHLPWFRMSD
PYVGGEMRIR DLLAHRSGLS LGAGDLLFWP TTSYTTEEVV QRLAKVPLKG GFRDRYAYDN
ILYAVAQKVI EQVSGQSYEA FLQQRIFAPV GMRGTRFNAD HLQAGDHAAV GHAKYDFTEL
RTVAPLTWSN NSGAGGIYSS AHDMALWMNV QLAGGILPDG KPLFSAKRQH EMWSMITPIP
IGEVQLPEFA AARPNFAGYG EGWSLSDYRG HRMVWHTGGW PGMVSRLTLL PDQKLGVVVL
TNQEVGAAFN AVTFQVLDAF LRVPPTDWTA AYAKLVEKAH SDADASWKKH QDARAARSTP
SLPLRSYAAT YRDPWYGDVV IVQDGKRLRL QFAKTAQLVG TLEHWQHDSF IVRWDDRSLN
ADAFVNFLLT PDGAVREMRM EPISPLTDFS FDFQDLVLTP VPTETAAGK
|
|---|
| |