| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04826 |
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| Symbol | |
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| ID | 6304969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1448946 |
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| End bp | 1451342 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642638742 |
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| Product | Putative signal protein with PAS(PAC), GGDEF and EAL domains |
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| Protein accession | YP_001912619 |
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| Protein GI | 188575690 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGG CAAAGGGCGG TGGACAGATC ATGCAACTGG TGCGTGGCTG GCTGACGCTT
CCTCTAGCGC TCTTGATCGG TATTGCCGTC TGCATGGCGG TGGTCTCGGC GCTGCTGATC
GAAATTCAAT CCGGCGCCAC CGCCTGGATC GTTGGCCAGA GCCATTGGTC CAACGCCCAG
CAGGAATCGG TGTACTGGAT GGAGCGCTAC CTGGGCAGCG GCAATACAGC CGATCTGCAA
TCCGCTTGCC GCGTGCTGGA AGTGCCGCTG GGCGATCGTG CGGCGCGCGT GGCGATCGAA
CAACCGGTGA TCGATTGGGA CGCGGTCTAC GCTGGTCTCG GCGCTGGTCG CAATGCCCGT
GAGGACATGC CGCATATGGT GCGGCTGTAC CGTTATGGGC AGCAGTTTCC GTATCTCGGC
GACGCCATCG CGCTGTGGAA GCGCACTGAC GGCGACGTCC TGCAACTGAG TGCCTTGGCC
GATCGTGCCG CCTCGGTACA GGCCGCCACC CGGCCAGACC CGCGCGCATT GCAGGCACTG
CGCGATGAGC TGCATGTGCT GGATGGCCGC ATGCGCCGCG ATGCTTCCCA ATTCCTGGGC
TATCTGACCC GCTGCGCGCG GCTGCTGCAC GATGTGATGG TGGTCTGCAG CCTGGTCACC
TTGCTGCTGG TGCTGATCAC CTGCGTGCTG GCCATGCGGC GCATCCGCGA TTACCTGCTG
TCGCACGAAG GCCGCTTCCG CACCGCGTTT CAGCAGGCGG CGCTGGGCAT GGTCAAGTTC
GATCTGCGCG GCAACGTGCT CGATGCGAAC GCGTCGATGG CCAACATCCT GCTGTACCGG
CCGGAAGAGC TGCAGGCCTG CACGCTGGCC GAGGTGATGC ACCCGGAAGA CATCAAGCTG
GACAGCCGCG GCATGCTCGA TTGGCCCAAG CTGCTGCAGT CCGGCGAGAA GCGCTTCGTC
CGCGCCGACG GTGGGGTGAT GTGGGGCCGC TGGAGCGCAT CGCTGGTGGA GCCGGGGCCG
GAAGAGCCGA CCCTGGTGCT GGCGGTGATC GAAGATGTGT CGCATGCGCA CGACCTGGCC
GACCAAGTGG CCTTCCATGC GTGCCACGAT GCGCTGACGG GGCTGATCAA TCGGCATGAA
ATCGAGCGCC GGCTGCAGCT CCTGATCGAA CTGCCGCGAT CGCCGCAGAT GTGCCATGCG
CTGTGCTTTG TCGACATGGA CTATTTCAAG CTGGTCAACG ACACCTTCGG GCATGCAGTC
GGCGACAAGT TCCTGTGCCA CTTTGCCGAT GTGATCACCA TGCAGTTGCG TCCCGGCGAC
TGGCTGGGGC GTCTGGGCGG CGATGAATTC GCCATCCTGT TGGCCAATAC CGATTTGCCG
CAGGCGCGCG CCTTGCTGGA GGGCATGCAC GCCGTACTCG GGCAACCGTG GAGCCATCAG
GGCGGGCGAC CGCTGACGCC GAGCTGCAGT TTTGGTGTGG TGGAGATTCG CCAGTCCGCC
AGTGACGTCA ATAGCTTGAT GACCGCTGCC GATCTGGCCT GTCATGCGGC CAAGGAAGAA
GGGCGCAACC GCATTCGCTG CTTCAACGAA ACCGATGTGG CGCTGGCGCA GCGCCGCCAC
GACGGTGGCT GGATCAGTGC GGTGCAACTG GCCATCGCCG AAGAACGCTT GCTGTTGTAC
GCGCAGAAAA TCCAGGTGCT GAGCGACCCG GGGCGGCTGC AGTACGAGGT GCTGGTGCGT
ATGCGTGCCA GCGACGGGCG GGTGCTGAGT CCGGGTGAAT TCCTGCCGGC CGTGGAGCGT
TACGGCTTGG GGCGCATGGT CGATACCTAT GTGCTGGAAT CCTTGTGCGC GCAGCTGTCG
GCCAACCCGA TGCATCTGGC GATACTGGAC CTGTGCCACG TCAATCTGTC TGCGCAATCG
ATCGCGCAAC CGGATTTTCT CGACTTCGTC TGTGCCCTGT TCGAACGCTA CCCGGCCCTA
GTGCCGAAGC TGTGCATGGA GATCACCGAG ACCGCGGTCA TCGGCGACCT GGAACATGCG
CAACGTTTCG TGCAGAGCGT GCGTGCGCGT GGCTGCCACG TGGCGCTGGA CGATTTCGGC
AGCGGCATGG CCTCGTTCGG TTATCTCAAG CAATTCACCG TGGACGTGTT GAAGATCGAC
TGCGGCTTCG TGCGCAACTA CGCGCACGAT GCGGTGGATC GTGCGGCGGT GCACTCGATC
GCCCAGGTCG GGCTGGCGCT AGGCATTGAA GTGGTGGCCG AAGGTGTGGA ATCGGAGGCC
GACATCCCCG GGCTGCGCGA CGCTGGCGTA GGCCAGGTGC AGGGCTTCAG TCTGCATCGT
CCCTGTCCGC TGGAAGAGCT GCTGCACCCG CCGCAGCTGG TGCCCGTGTC TGGATAA
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| Protein sequence | MAQAKGGGQI MQLVRGWLTL PLALLIGIAV CMAVVSALLI EIQSGATAWI VGQSHWSNAQ
QESVYWMERY LGSGNTADLQ SACRVLEVPL GDRAARVAIE QPVIDWDAVY AGLGAGRNAR
EDMPHMVRLY RYGQQFPYLG DAIALWKRTD GDVLQLSALA DRAASVQAAT RPDPRALQAL
RDELHVLDGR MRRDASQFLG YLTRCARLLH DVMVVCSLVT LLLVLITCVL AMRRIRDYLL
SHEGRFRTAF QQAALGMVKF DLRGNVLDAN ASMANILLYR PEELQACTLA EVMHPEDIKL
DSRGMLDWPK LLQSGEKRFV RADGGVMWGR WSASLVEPGP EEPTLVLAVI EDVSHAHDLA
DQVAFHACHD ALTGLINRHE IERRLQLLIE LPRSPQMCHA LCFVDMDYFK LVNDTFGHAV
GDKFLCHFAD VITMQLRPGD WLGRLGGDEF AILLANTDLP QARALLEGMH AVLGQPWSHQ
GGRPLTPSCS FGVVEIRQSA SDVNSLMTAA DLACHAAKEE GRNRIRCFNE TDVALAQRRH
DGGWISAVQL AIAEERLLLY AQKIQVLSDP GRLQYEVLVR MRASDGRVLS PGEFLPAVER
YGLGRMVDTY VLESLCAQLS ANPMHLAILD LCHVNLSAQS IAQPDFLDFV CALFERYPAL
VPKLCMEITE TAVIGDLEHA QRFVQSVRAR GCHVALDDFG SGMASFGYLK QFTVDVLKID
CGFVRNYAHD AVDRAAVHSI AQVGLALGIE VVAEGVESEA DIPGLRDAGV GQVQGFSLHR
PCPLEELLHP PQLVPVSG
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