| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04699 |
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| Symbol | impA |
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| ID | 6304846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1319573 |
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| End bp | 1320646 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642638619 |
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| Product | ImpA, N-terminal |
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| Protein accession | YP_001912496 |
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| Protein GI | 188575567 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.494235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGATC TGGATGCCCT GCTGGCGCCG ATTTCCGACC ATCAGCCGGC CGGCGAAGAC
CTGTCTTTCT CCATCGAGTT CGATCGCATC CAGGAAGCCA GACGCTCGGA CGATCCGACC
CTGGACCAGG GCGAGTGGCA GACCGATATC AAGTATGCGG ACTGGTCCAG CGTCGCCCGC
CAGTGCGGCG ATCTGCTGCA GACGCGTACC AAGGACCTAC GCCTGGCCGG CTGGATGACC
GAGGCGACCA CCCAGATCGA CGGCTTCGCC GGGCTGGCGC TGGGTTACCG GCTGATCGCC
GGGCTATGCG ACCGGTACTG GGACGAGGTG CACCCGCTGG TCGTCGATGG CGACCACGAA
GAGCGCATCG GCAACCTGAG CTGGCTGCTG ACCAATTCGC TGCATTGGTT GCGCGCGGTG
CCGATCGCCT CGGGACCGCA GGGCCGTTTC GGTCTCAACG CTTTCGAGGC CGCGCATACC
CGCAGCGCCA ATGCCGGATC CGGCGACGAC GAAGGCCAGC CCAGCCTGGA CCTGCTCGAG
GCCGTACGGC GCGATACGCC TCACGATTTC TACCGGCAGT TGGTCGATGC GCTACTCAAT
TGCGCCGAAG CGCTGCAGTC GCTACAGGCG GCGGTGGACG ATCGCCTAGG CATCGACGGA
CCCAGCTTCA GCGCGGTGCG CGAGCAGGTG GAACACCTGC AGCGCACCGT GGCGCGGTTC
GCCCGCGATG CTGGGCTACT GCTGGATGGC GAGGCCGAAG CCGGCCCGCA CGACATGCCG
GGCATCGGGT TCGGCCCGGC CGCGAACAAG GACGCGCCGT CGGCGCCGCC GCCGGCGCCA
CGCGAGCCGG GCGGCGCACC GACCACCCGC AAGGAAGCGT TGGCGCAGCT GCGTCAGGTC
GCCGAATTCT TCCGGCGTAC CGAACCGCAC AGCCCCGTCG CCTACTTGGC CGAAAAAGCC
GCGCGCTGGG GCGAGATGCC GCTGCACGTG TGGTTGAAGC GGGTTATCAA AGACGGCAGC
GTCCTCAACC AGATGGAAGA GATGCTGGAC GTCAACCAGA ACCTGGAGCA GTAG
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| Protein sequence | MLDLDALLAP ISDHQPAGED LSFSIEFDRI QEARRSDDPT LDQGEWQTDI KYADWSSVAR
QCGDLLQTRT KDLRLAGWMT EATTQIDGFA GLALGYRLIA GLCDRYWDEV HPLVVDGDHE
ERIGNLSWLL TNSLHWLRAV PIASGPQGRF GLNAFEAAHT RSANAGSGDD EGQPSLDLLE
AVRRDTPHDF YRQLVDALLN CAEALQSLQA AVDDRLGIDG PSFSAVREQV EHLQRTVARF
ARDAGLLLDG EAEAGPHDMP GIGFGPAANK DAPSAPPPAP REPGGAPTTR KEALAQLRQV
AEFFRRTEPH SPVAYLAEKA ARWGEMPLHV WLKRVIKDGS VLNQMEEMLD VNQNLEQ
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