Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04690 |
Symbol | |
ID | 6304604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1096445 |
End bp | 1098097 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642638379 |
Product | ISXo8 transposase |
Protein accession | YP_001912261 |
Protein GI | 188575332 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTCA TCACGTCTCT TGTCGCTTAC TCCAAGAAAA CAAAATCTCA CGTCGCCACG TTGAACTACG ACAATCTCCT TTATCAACCC ATGATTAAAG AAGAAGTTCT CGATGGCTAT AACGGAGCAC TTGTGGACGG ATTTTGGAAA AATGGATTCG CAGAAGACAA CCTGGAGAGG AAATACGGGC GCGACTTCAG CTATTACATG CACCTGCACG GATCGCCGTT GTTTGTTGAT CGAGATGACG GCGATAGAGA TAATTCCACT GTGTTACAAA TAATCGTATC TTTGTGCCAC TATTGGAAGA CCTTCAGGCC GCGTGGGAGA GCTGTGTTGA ATAGGTCACT GGAAGTGCGT TTTGAACAGT ACGGGGAAGT AGTTGCTGCC GCCCTGTCCC ATGCGGATCG CAAACAGCCC GCACACTGGT ACCTGAAGGG GTTGCTACTG CCTGGAGGGC GCAAGAGCGT GGAGCCCATG GCCGCGCGGG TGCACCCGCA GAACGTGCGC TCAGCCCATC AATCGATGCA CCATCTGGTG GCCGATGCCG ACTGGAGCGA TCAAGCGCTG CTGGCGGCGG TGGCGGCACA GGTGCTGCCG ACCCTGAGCA GGAAGAGCGC AGCGTGTCAC TGGATCGTGG ACGACACGGG ATTTTCAAAG AAAGGGGTGC ATTCGGTCGG TGTTGCACGC CAGTACTGCG GCCGCCTTGG CAAGACGGAC AATTGCCAGG TTGCCGTGAG TTTGTCGATC GCCAACGAAC ACGGCAGCCT GCCAGTGGGC TATCGGCTGT ATCTTCCCGA GCAGTGGGCT CAGGACACTG TGCGGCGCAA GAAGGCAGGC GTTCCGGATC AGGTCGTGTT TCAGACCAAG ACAGCGCTGG CCATGGATCA GATCGACAGC GCGCTGGCGA CAGGGATGGC GGCAGGCGTC GTGCTAGCCG ATGCGGCCTA CGGCACCGAG ACCCACTGGC GAGACCAGCT CAGCGAACGC GGCCTGCTGT ACATGGTTGG CGTCCGCAGC AACACGAAGG TCTGGTGGGG ATCGCACCAA CCTGCGCCCA TGCCGCCAGC CAGCCCTAAG GGCGGTCGGC CCCGCACACG ACCGATGCGC GATAGCGCAC ATGCGCCGAT CTCGGTACAT GAAGTCGCGC AGCGCTTGCC CGCAAGGACG TATCGGCAGG TCAGCTGGCG CCAGGGCAGC GACGCAACGC TCAGTTCGCG GTTCGCGGCG GTGCGGGTTC GTGCCGCACA CAATCGCCAG GCACATGACG AGCAGTGGCT GCTGATCGAG TGGCCGCCGG GAGAGTCCGA GCCCCGCCAC TACTGGTTCT CGACGCTACC AAAGCAAACG CCGGTCAAGA CACTGGTTGC CACGGCACAA GGCCGATGGC GGATTGAACG CGATTATCAG GAGCTGAAGT CGGAGTTGGG CCTGCATCAC TATGAAGGGC GCAACTGGCG TGGTTTTCAC CATCACGCCA GTCTGTGCAT CGCCGCATAC GGGTTCTTGA TGCGCGAGCG CCTGCGCAGT AAAAAAAACT CCGTCGCATT CAAGATGCCT GCAGTATCCA AAAGCGTCCG CCCGCGCCGG TCTGGCCCCA ATGCAACGTC ACCATCCCAA CTCGATTGCC ACGCTGGCCT TCGGACTGGC TAG
|
Protein sequence | MDFITSLVAY SKKTKSHVAT LNYDNLLYQP MIKEEVLDGY NGALVDGFWK NGFAEDNLER KYGRDFSYYM HLHGSPLFVD RDDGDRDNST VLQIIVSLCH YWKTFRPRGR AVLNRSLEVR FEQYGEVVAA ALSHADRKQP AHWYLKGLLL PGGRKSVEPM AARVHPQNVR SAHQSMHHLV ADADWSDQAL LAAVAAQVLP TLSRKSAACH WIVDDTGFSK KGVHSVGVAR QYCGRLGKTD NCQVAVSLSI ANEHGSLPVG YRLYLPEQWA QDTVRRKKAG VPDQVVFQTK TALAMDQIDS ALATGMAAGV VLADAAYGTE THWRDQLSER GLLYMVGVRS NTKVWWGSHQ PAPMPPASPK GGRPRTRPMR DSAHAPISVH EVAQRLPART YRQVSWRQGS DATLSSRFAA VRVRAAHNRQ AHDEQWLLIE WPPGESEPRH YWFSTLPKQT PVKTLVATAQ GRWRIERDYQ ELKSELGLHH YEGRNWRGFH HHASLCIAAY GFLMRERLRS KKNSVAFKMP AVSKSVRPRR SGPNATSPSQ LDCHAGLRTG
|
| |