Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04661 |
Symbol | |
ID | 6304628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1127188 |
End bp | 1127787 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642638403 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001912285 |
Protein GI | 188575356 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0165379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGGTCA GTGAAGGCGA CAGTATCGCC ATTGTCGGCG CGTCCGGTTC GGGCAAGACC ACCCTGCTGG GCCTGCTTGC CGGGCTGGAC CTGCCCAGCC GCGGCAGCAT CGCACTCTCG GGCCAGGACC TGGGCCAGCT CGACGAAGAA GCCCGCGCGG CCTTACGCGC CCGCGAAGTC GGCTTCGTGT TCCAGAGCTT CCACTTGCTG CCGGCGCTGA CCGCCGAAGA AAACATCGCG CTGCCGCTGG AACTGGCCGG GCGCGAAGAT CCGGCGCGGG TGCGCGAGGT GCTGGAGGCA GTCGGCCTGA GTGCGCGTGC GCGGCATTAC CCGCGCCAGC TCTCCGGTGG CGAGCAGCAA CGCGTGGCGT TGGCGCGCGC GTTCGTGGCC CGGCCGCGCA TCCTGTTCGC CGATGAGCCC ACCGGCAGCC TCGACCAGGC CACCGGCGCG CAGATCAGCG ACCTGCTGTT CGCGCTCAAT GCCACCAGCG ACACCACCCT GGTGCTGGTC ACCCACGACA TGCGTTTGGC GCAGCGCTGC CGTCACATCT ACCGCATCGA CAGCGGCCGC CTGCACGCAC AGACCGGTCC GGCCGCATGA
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Protein sequence | MTVSEGDSIA IVGASGSGKT TLLGLLAGLD LPSRGSIALS GQDLGQLDEE ARAALRAREV GFVFQSFHLL PALTAEENIA LPLELAGRED PARVREVLEA VGLSARARHY PRQLSGGEQQ RVALARAFVA RPRILFADEP TGSLDQATGA QISDLLFALN ATSDTTLVLV THDMRLAQRC RHIYRIDSGR LHAQTGPAA
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